| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_1231 |
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| Symbol | secF |
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| ID | 3366726 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 1389879 |
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| End bp | 1390790 |
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| Gene Length | 912 bp |
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| Protein Length | 303 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637651570 |
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| Product | preprotein translocase subunit SecF |
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| Protein accession | YP_234320 |
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| Protein GI | 66044479 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0341] Preprotein translocase subunit SecF |
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| TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR00966] protein-export membrane protein SecF |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.611016 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.761235 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTACGTA CCATCAACTT CATGGGCGTT CGCAATGTTG CGTTCGCCAT CACGATGCTC
CTTACCGCAC TGGCGTTGTT CAGCTGGTTC CATAAAGGGC TCAACTTTGG TCTGGACTTC
ACCGGCGGTA CGCTCATCGA GCTGACCTAC GAACGTCCCG CCGACCTGGG CAAGGTCCGT
CAGGAGCTGG TTTCGGCGGG CTATCACGAA GCCGTTGTAC AGAGCTTTGG CGCCACCACT
GACTTGCTGG TGCGCATGCC GGGTGAAGAC CCTCAACTGG GCACTCAGGT TGCCGAGGCG
CTGCGCAAGG CCGGTGCCGA TAACCCGGCA GTGGTCAAGC GTGTCGAATT CGTCGGCCCG
CAGGTGGGTG AAGAGCTGCG CGATCAGGGC GGCCTCGGCA TGCTGATGGC GCTGGGCGGT
GTTCTGATCT ACCTGGCATT CCGCTTCCAG TGGAAATTCG CCGTCGGGGC GATCATCTCG
CTGATCCACG ACGTGGTGGT GACGATGGGT ATCCTGTCGT TCTTCCAGAT CACCTTCGAC
CTGACGGTGC TCGCGGCGGT GCTGGCGATC ATCGGTTACT CGCTGAACGA CACCATCGTG
GTCTTCGACC GGGTACGCGA AAACTTCCGC CTGCTGCGCA AGGCTTCGCT GATCGAGAAC
ATCAACATCT CCACCACCCA GACACTGCTG CGCACCATTG CCACCTCGGT TTCGACCCTG
CTGGCGATCG TGGCATTGTG GGCATTTGGC GGCGACAGCC TGGAAGGCTT CTCCATCGCG
TTGTTCATCG GTGTGCTGGC GGGTACCTAC TCGTCCATCT ACATCGCCAA CGTGGTGCTG
ATCTGGCTGA ACCTGACCAC CGAGGACCTG ATTCCTCCAG TGGTCGTCGA GAAGGCTGAC
GACCTGCCGT AG
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| Protein sequence | MLRTINFMGV RNVAFAITML LTALALFSWF HKGLNFGLDF TGGTLIELTY ERPADLGKVR
QELVSAGYHE AVVQSFGATT DLLVRMPGED PQLGTQVAEA LRKAGADNPA VVKRVEFVGP
QVGEELRDQG GLGMLMALGG VLIYLAFRFQ WKFAVGAIIS LIHDVVVTMG ILSFFQITFD
LTVLAAVLAI IGYSLNDTIV VFDRVRENFR LLRKASLIEN INISTTQTLL RTIATSVSTL
LAIVALWAFG GDSLEGFSIA LFIGVLAGTY SSIYIANVVL IWLNLTTEDL IPPVVVEKAD
DLP
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