Gene Psyr_1161 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_1161 
Symbol 
ID3366655 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp1315662 
End bp1316348 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content58% 
IMG OID637651502 
Producttranscriptional regulator GntR 
Protein accessionYP_234253 
Protein GI66044412 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.480758 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAATTCCC CGAACACCAC CAACGCGCTG GCTGAAGACG TCTATCGGCG GCTCAAGCAG 
GAGATTTTCG ACTTCTACCT GCTGCCCTAC GACCGCTTCA CCGAAACCCA ACTGGCCGAC
CGTTATCAGG TCTCGCGAAC GCCGGTGCGT GACGCACTCT ACCGCCTGCA ACGCGAAGGC
TACCTGGACG TCGAGTTCCG GCGTGGCTGG TCAGTCAAGC CTCTGGATTT CAACCAGATC
GACCAGCTCT ACGATCTGCG CATCGTGCTG GAGTGCGCGG CGGTCGAGCG CATCTGTGCC
TGCGCCGAAG TGCATCCGGA ACTCACTATT CTGCGCCAGC ACTGGTTGAT CGATCGCGAT
TGCTGGCAGA TAGATATGCA AGTGGTCGCC GACCTCGATG AACAGTTCCA CACCCAACTG
GTGGCCGCTT CAGGCAACCT GGAAATGGCC CGCATCCATC AGGAAGTGAC CGAGCGCATC
CGTATTGTGC GCCGCCTGGA CTTCTTCAAA AGCGCGCGTA TCGAACATAC CTACCTCGAA
CACGCCGCGA TCCTCAATGC CCTTCAGGCG CGCAAACGTG ACGAAGCCTT ATTGCTGCTG
CGTTCCCATG TAGAGATCAG CAAACTGGAA GTACGCAAAC TGACGATCTC CATGCTCAGT
GATGCGCGGC GGCGGTATGA GGCGTGA
 
Protein sequence
MNSPNTTNAL AEDVYRRLKQ EIFDFYLLPY DRFTETQLAD RYQVSRTPVR DALYRLQREG 
YLDVEFRRGW SVKPLDFNQI DQLYDLRIVL ECAAVERICA CAEVHPELTI LRQHWLIDRD
CWQIDMQVVA DLDEQFHTQL VAASGNLEMA RIHQEVTERI RIVRRLDFFK SARIEHTYLE
HAAILNALQA RKRDEALLLL RSHVEISKLE VRKLTISMLS DARRRYEA