Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_1161 |
Symbol | |
ID | 3366655 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 1315662 |
End bp | 1316348 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637651502 |
Product | transcriptional regulator GntR |
Protein accession | YP_234253 |
Protein GI | 66044412 |
COG category | [K] Transcription |
COG ID | [COG1802] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.480758 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAATTCCC CGAACACCAC CAACGCGCTG GCTGAAGACG TCTATCGGCG GCTCAAGCAG GAGATTTTCG ACTTCTACCT GCTGCCCTAC GACCGCTTCA CCGAAACCCA ACTGGCCGAC CGTTATCAGG TCTCGCGAAC GCCGGTGCGT GACGCACTCT ACCGCCTGCA ACGCGAAGGC TACCTGGACG TCGAGTTCCG GCGTGGCTGG TCAGTCAAGC CTCTGGATTT CAACCAGATC GACCAGCTCT ACGATCTGCG CATCGTGCTG GAGTGCGCGG CGGTCGAGCG CATCTGTGCC TGCGCCGAAG TGCATCCGGA ACTCACTATT CTGCGCCAGC ACTGGTTGAT CGATCGCGAT TGCTGGCAGA TAGATATGCA AGTGGTCGCC GACCTCGATG AACAGTTCCA CACCCAACTG GTGGCCGCTT CAGGCAACCT GGAAATGGCC CGCATCCATC AGGAAGTGAC CGAGCGCATC CGTATTGTGC GCCGCCTGGA CTTCTTCAAA AGCGCGCGTA TCGAACATAC CTACCTCGAA CACGCCGCGA TCCTCAATGC CCTTCAGGCG CGCAAACGTG ACGAAGCCTT ATTGCTGCTG CGTTCCCATG TAGAGATCAG CAAACTGGAA GTACGCAAAC TGACGATCTC CATGCTCAGT GATGCGCGGC GGCGGTATGA GGCGTGA
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Protein sequence | MNSPNTTNAL AEDVYRRLKQ EIFDFYLLPY DRFTETQLAD RYQVSRTPVR DALYRLQREG YLDVEFRRGW SVKPLDFNQI DQLYDLRIVL ECAAVERICA CAEVHPELTI LRQHWLIDRD CWQIDMQVVA DLDEQFHTQL VAASGNLEMA RIHQEVTERI RIVRRLDFFK SARIEHTYLE HAAILNALQA RKRDEALLLL RSHVEISKLE VRKLTISMLS DARRRYEA
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