| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_1157 |
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| Symbol | |
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| ID | 3366651 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | - |
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| Start bp | 1308739 |
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| End bp | 1309995 |
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| Gene Length | 1257 bp |
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| Protein Length | 418 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637651498 |
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| Product | PAS:GGDEF |
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| Protein accession | YP_234249 |
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| Protein GI | 66044408 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.958814 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.862731 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCTCAT CCAGCCAGCG TCTTGCCTTG CTTGAAGCAG TTGTTGAACA GTCATTCAAT
GCCGTATTGA TCACCGACGC CAATCTGGCC AATGGCGGCC CCTTCATTGT GTACGTCAAT
CCGGCATTCT GCGCCATGAC CGGCTACACG GCCGAGGCAT TGATCGGAGC CTCGCCACGG
ATCCTGCAAG GCCCGGACAC CGATCCCCAA GTGATCGAGC GGATGCGCGA ATGCCTGAGC
GAAAGTCTTT TTTTCGAAGG GTCGACGGTC AATTACCGCG CGGACGGAAG TCCTTACATC
GTCGAGTGGA AAATTTCTCC CGTGCGCGAC GATGCCGGTA CGGTATGCAA CTTTGTCTCT
GTGCAGCAGA ACATCAGCCC GCGCATCCGC GCCGAGCGTG AGCAACACCT GCTGGCGCAG
GCGCTGAACG CTGCGCTTGA TCCGATTATC ATCACCGACT GCAATTCCAC CATCGTGTTT
GCCAATGAGG CCTTTCAGCA GATCACTGGC TACAGCAGCA GCGAAATCCT CGGCGAAAAC
CCGCGAATGC TGAGCTCTGG AAAACACGAT GAGGCGTTCT ATGCGCAATT CAAGGAAGCG
CTGAAGAGTG GCGCCCCGCT TCGCACGACC TTCATCAACA AGCGCAAGGA TGGCTCGCTG
TTCTATGCGG AACACAGCAT TTCTCCACTG TGTAATCTGG AGGGCGCAAT CACCCATTAC
GTCAGCATCA GCCAGGATGT GACCACACGC CTGGGCCGTG AACAAAAGTT GCTGGAGATT
GCGCACAGCG ATCCGCTGAC CGGGCTGGAT AATCGTCGCT CCGCCGAGCA TACGCTTGAG
CGGCAAATAC CTGCGGTGAG CATGTCGGGC AAGCCGTTCA GCCTGATCAT CTGCGATATC
GATCATTTCA AGGCGGTCAA TGACCGGTAC GGCCATCCTG CCGGCGACAG CGTAATCACC
AGCGTTGCGG CCATCCTCAA ACAGCGTATC CGCCTCTTGG ATGTCGCCGC TCGATGGGGA
GGAGAAGAGT TTCTGATCCT GGTGCCCGAC AGCTCGTTGA AACAGGCTGC CGAACTCGCG
GAACGCATTC GCAACAGCGT TGAAAGCCTG GTGATTCCGG AAACCGGGTC GGTGACCATT
TCTCTGGGCG TTGCAGAGCT CAGCGCCGGG GAAACGGCCG CCAGCCTCAT TCAGCGTGCA
GACAAGGCGC TTTATCAGGC CAAGCGCTTG GGCCGCAACC GGGTGGAATG CGCTTAG
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| Protein sequence | MTSSSQRLAL LEAVVEQSFN AVLITDANLA NGGPFIVYVN PAFCAMTGYT AEALIGASPR
ILQGPDTDPQ VIERMRECLS ESLFFEGSTV NYRADGSPYI VEWKISPVRD DAGTVCNFVS
VQQNISPRIR AEREQHLLAQ ALNAALDPII ITDCNSTIVF ANEAFQQITG YSSSEILGEN
PRMLSSGKHD EAFYAQFKEA LKSGAPLRTT FINKRKDGSL FYAEHSISPL CNLEGAITHY
VSISQDVTTR LGREQKLLEI AHSDPLTGLD NRRSAEHTLE RQIPAVSMSG KPFSLIICDI
DHFKAVNDRY GHPAGDSVIT SVAAILKQRI RLLDVAARWG GEEFLILVPD SSLKQAAELA
ERIRNSVESL VIPETGSVTI SLGVAELSAG ETAASLIQRA DKALYQAKRL GRNRVECA
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