Gene Psyr_1150 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_1150 
Symbol 
ID3366644 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp1301387 
End bp1303042 
Gene Length1656 bp 
Protein Length551 aa 
Translation table11 
GC content58% 
IMG OID637651491 
Productchemotaxis sensory transducer 
Protein accessionYP_234242 
Protein GI66044401 
COG category[T] Signal transduction mechanisms
[N] Cell motility 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCAGA TTCAAACGAC GGCTACCAGC GGCATGACCG TAAAAAACAG GCTGATGGCG 
TCTACATTTG CCATCATCGC TGCATTTATC GTGCTGTCGG TTTTCATGAT CCAGACGCTC
AAGACATCCA CCGCGAATGT CGACGCCCTC TACAACAGAG ATTTTCTGGC TACGGAAGCG
GTCAACAATA TCGATGGTGC GCTTACGCGG GTGGATATCA ATATTTTACG CATGATCGCC
ATCGGCAACC CGGAGCAGAC GGCAGGCTGG AAGAATGAAA ACGAAGCGGC CTTCAGCAAG
CTGGATGAGC TGACCGTCCA GTTGAGCAAG AACACCGCAG AAACCCTTGA TGTGACCTTG
ACCCAACAAT TGCAGCGTGG CTATGTCAAG TTGCGGGACG GCATGCGGCA CCAGACCAGC
GTGATCCAGA CCGGTGATAT CGCCGCCGCC ACCAACATTA ACCGCACCGA AGTCAAACCC
TTTGCCGAGC AGGTGTTCAA GACCCTGCAA ACGCTGCGCG AACAAGGCAA GCAACGTGCG
GGCGAGCGTT TCGATGCGCA GGAATCAAGC GCCACTCAAG CCAATAATCT GTCCATCGCC
GCCACGCTGA CAATCGCGAT ACTGGGCGTG ATCGTGACCC TCATGACCAT ACGCAGCATC
CTGTCAGCCA TTGGGGGCGA ACCGAGCACC GTCGCGACGA TCACACGCAC CATCGCCCGA
GGCGATTTGA GCAGCACGAT CAACATCAGC GCCAATGACA CTTCCAGCGT TGCTGCTGCG
GTCGTTGCGA TGCAGACTCA ATTGCGCGAC ACCCTGCAGC AGATCTCCAG TTCTGCAACT
CAACTGGCCG CCGCTGCCGA AGAGATGACT GCAATCACCG AAGACGGTGT GCAAGGCATC
CAGCGTCAGA ACAACGAAAT CGACCAGGCC GCCACCGCAG TCAATGAAAT GACCAGCGCA
GTGGAAGAAG TCGCGCGCAA TGCCGAGCAT ACGGCGCGCT CGTCCAGTAA TGCGACCAGC
GCCGCGCAAG ACGGTCTGGG GCTGGTCAAA AAGACCGTGA CCTCAATCAA CACCATGAGC
ACGGATGTGC AGAAAACCGC GACCCTGATT GGCGAGCTGG CAGGTCAGTC CCGCGACATC
GGCAAGGTGC TGGATGTTAT TCGGGGCCTT GCGGAACAGA CCAATCTGCT GGCGCTCAAT
GCGGCGATCG AAGCGGCTCG CGCGGGCGAG GCTGGACGCG GGTTTGCCGT GGTGGCGGAT
GAAGTGCGTG CTCTGGCTCA CCGCACTCAG CAATCCACCA GCGAAATCGA ACGTCTGGTG
ACCAATATTC AGAACGGCAC CGAACGCGCA GTAGGCTCCA TGCGCGGCAA CACCGAGCTG
GCCAGCGAAA CGCTTGGCAT TGCAGAGGGC GCGAACGAGT CTCTGACCGT CATCAGCGCT
GCCGTGAGCG AGATCAATGA TCTCAATCTG GTGATCGCCA GTGCGGCCCA GCAGCAGGCC
CATGTCGCCC GGGAAGTGGA TCGCAACCTC ATGAACATCC GTGACCTTTC GGCGCAATCT
TCGTCTGGCG CGCAACAGAC CGCCAGTGCA AGTCGAGAGC TGTCAACGCT GGCGCTGGAC
CTGAACAACA TCGTGGGACG CTTCCGCCTG TCCTGA
 
Protein sequence
MSQIQTTATS GMTVKNRLMA STFAIIAAFI VLSVFMIQTL KTSTANVDAL YNRDFLATEA 
VNNIDGALTR VDINILRMIA IGNPEQTAGW KNENEAAFSK LDELTVQLSK NTAETLDVTL
TQQLQRGYVK LRDGMRHQTS VIQTGDIAAA TNINRTEVKP FAEQVFKTLQ TLREQGKQRA
GERFDAQESS ATQANNLSIA ATLTIAILGV IVTLMTIRSI LSAIGGEPST VATITRTIAR
GDLSSTINIS ANDTSSVAAA VVAMQTQLRD TLQQISSSAT QLAAAAEEMT AITEDGVQGI
QRQNNEIDQA ATAVNEMTSA VEEVARNAEH TARSSSNATS AAQDGLGLVK KTVTSINTMS
TDVQKTATLI GELAGQSRDI GKVLDVIRGL AEQTNLLALN AAIEAARAGE AGRGFAVVAD
EVRALAHRTQ QSTSEIERLV TNIQNGTERA VGSMRGNTEL ASETLGIAEG ANESLTVISA
AVSEINDLNL VIASAAQQQA HVAREVDRNL MNIRDLSAQS SSGAQQTASA SRELSTLALD
LNNIVGRFRL S