| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_1142 |
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| Symbol | |
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| ID | 3366636 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 1293302 |
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| End bp | 1295314 |
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| Gene Length | 2013 bp |
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| Protein Length | 670 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637651483 |
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| Product | cytochrome-c oxidase |
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| Protein accession | YP_234234 |
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| Protein GI | 66044393 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0843] Heme/copper-type cytochrome/quinol oxidases, subunit 1 |
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| TIGRFAM ID | [TIGR02843] cytochrome o ubiquinol oxidase, subunit I |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.303035 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTGGCA AATTAAGTCT GGAAGCGGTG CCGTTCCACG AGCCCATAGT CATGGTGACA
CTTGCCATGA TCGCGCTCGG CGGCATTGCG GTTGTCGGGT TGATCACCTA TTTCCGCAAG
TGGACGTACT TGTGGTCTGA GTGGCTGACC TCTGTCGACC ACAAGAAAAT CGGCGTGATG
TACATCGTCG TTGCCATGGT CATGCTGCTG CGCGGTTTTG CCGACGCGAT CATGATGCGT
ACCCAACTGG CGATGGCCCA GAACGGTTCC GAAGGGTTCC TTCCGCCTGA ACACTATGAC
CAGATCTTCA CCGCTCACGG TGTGATCATG ATCATCTTCA TGGCGATGCC GTTCTTCACG
GGTCTGATGA ACATCGTTCT GCCTCTGCAG ATCGGCGCTC GCGACGTGGC GTTCCCGTTC
CTGAACTCCC TGAGCTTCTG GCTGCTGGTC GCAGGTATGC TGCTGATCAA CATCTCCCTG
GGTGTCGGTG AGTTCGCCAA GACCGGCTGG GTCGCGTATC CGCCTCTTTC CGGGTTGCAA
TACAGTCCTG GCGTAGGGGT TGACTACTAC ATCTGGGCGC TACAGTTATC CGGCTTGGGT
ACGACGCTGA CGGGGGTCAA CTTCCTCGTG ACCGTGCTGA AGATGCGTAC CCCTGGCATG
AAACTGATGG ACATGCCGAT CTTCACCTGG ACCTGCACCT GGGCAAACAT CCTGATCGTG
GCTTCGTTCC CGATCCTGAC CGCTACCCTG GCGTTCCTGA CCCTTGACCG CTACCTGGAC
TTCCACATTT TCACGAACGA AATGGGCGGT AACCCCATGA TGTACGTGAA CCTGTTCTGG
GCGTGGGGTC ACCCTGAGGT GTACATCCTG ATCCTGCCGG CCTTCGGCGT GTTCTCGGAA
GTCATCTCGA CGTTCTCCGG CAAGCGTCTG TTCGGCCACA AGTCGATGAT CTTCGCCTCC
GGTGCGATCT GTATCCTGGG CTTCATGGTC TGGCTGCACC ACTTCTTCAC CATGGGGGCG
GGTGCCAACG TCAACGCCTT CTTCGGTCTG GCGACGATGC TGATTGCGAT CCCGACGGGT
GTGAAGCTGT TCAACTGGCT GTTCACCATG TATCAGGGCC GTCTGCGCTT CACTGCGCCG
GTGCTCTGGA CCCTGGGCTT CATGGTCACC TTCTCGATCG GCGGCATGAC CGGCGTTCTG
TTGGCGATCC CGGGTGCTGA CTTCGTGCTG CACAACAGCC TGTTCGTAAT CGCTCACTTC
CACAACGTCA TCATCGGCGG TGCGGTATTC GGTTACATCG CCGGCTTCGC GTTCTGGTTC
CCTAAAGCGT TCGGTTTCAC CCTGAACGAG AAGTGGGGCA AGGCAGCGTT CTGGTTCTGG
ATCGTCGGCT TCTTCGTCGC ATTCATGCCG CTTTACGCGC TGGGCTTCCT GGGCATGACC
CGTCGTCTGA ACGCTACCGA CATGCCAGAG TGGAACATCT ACCTGGACGT CGCGCTGTTC
GGCGCCGTGC TGATTGCCAT GGGTATCGCT TCGCAGCTGA TCCAGCTGTT CGTGAGTATC
CGTGACCGCG ACAACAACCG CGATCTGACC GGTGACCCAT GGAATGGCCA TACCCTGGAA
TGGTCCACTT CTTCGCCTCC ACCGTTCTAC AACTTTGCCG AGCTGCCAAA AGCTGACGAC
ATCGATCCGT TCACCGATGC GAAACGTGCC GGTACCGCTT ACAAGGTTCC TGCCCGCTAC
TCGGCGATCC ACATGCCTAA CAACACGGCT ACCGGCCTGT ACATGGGTAT GTTGCTGACG
GTCTTCGGCT TCGCATTCAT CTGGCACATC TGGTGGCTGG TAGGCGCAAG CCTGGTCGCG
ACCATTGCAG TCTTCGTTGC TCACGCTGTC CGTGACGACC AGGGCTACAT GGTGCCTGCT
GAAGATGTAG CGCGTATTGA AGGTGAGCAT CACAAGGTCC TGGCGGCCAA CGGTGCATAC
ACTCCTGTCA AGTCCTCGCT GGAACAGGTT TAA
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| Protein sequence | MFGKLSLEAV PFHEPIVMVT LAMIALGGIA VVGLITYFRK WTYLWSEWLT SVDHKKIGVM
YIVVAMVMLL RGFADAIMMR TQLAMAQNGS EGFLPPEHYD QIFTAHGVIM IIFMAMPFFT
GLMNIVLPLQ IGARDVAFPF LNSLSFWLLV AGMLLINISL GVGEFAKTGW VAYPPLSGLQ
YSPGVGVDYY IWALQLSGLG TTLTGVNFLV TVLKMRTPGM KLMDMPIFTW TCTWANILIV
ASFPILTATL AFLTLDRYLD FHIFTNEMGG NPMMYVNLFW AWGHPEVYIL ILPAFGVFSE
VISTFSGKRL FGHKSMIFAS GAICILGFMV WLHHFFTMGA GANVNAFFGL ATMLIAIPTG
VKLFNWLFTM YQGRLRFTAP VLWTLGFMVT FSIGGMTGVL LAIPGADFVL HNSLFVIAHF
HNVIIGGAVF GYIAGFAFWF PKAFGFTLNE KWGKAAFWFW IVGFFVAFMP LYALGFLGMT
RRLNATDMPE WNIYLDVALF GAVLIAMGIA SQLIQLFVSI RDRDNNRDLT GDPWNGHTLE
WSTSSPPPFY NFAELPKADD IDPFTDAKRA GTAYKVPARY SAIHMPNNTA TGLYMGMLLT
VFGFAFIWHI WWLVGASLVA TIAVFVAHAV RDDQGYMVPA EDVARIEGEH HKVLAANGAY
TPVKSSLEQV
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