| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_1133 |
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| Symbol | |
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| ID | 3366627 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 1283830 |
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| End bp | 1286364 |
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| Gene Length | 2535 bp |
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| Protein Length | 844 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637651474 |
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| Product | fimbrial biogenesis outer membrane usher protein |
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| Protein accession | YP_234225 |
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| Protein GI | 66044384 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3188] P pilus assembly protein, porin PapC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.127861 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAATGGC GCAAAGAAGT TAATAAGGGA GTTATTGCCC AGTGCGCGCT CCCTCACCCC
CGACGCGGTG CGCTGGGTAT CGGTTTCGGA TTGACGTTGA TGTGTGCGGT CAGCGCGTCG
GCCGCCTCGT CGGGTGGCGA CGGGGCAGTC AGGTTCAATA CGGCGTTTAT CCAGGGAAGC
GATCAGCCGG CTGACCTTCA GGAGTTTCTG CGCTCCAATA GTGTATTGCC GGGTATTTAC
CGGGTTGATA TCTACGTCAA TCGCAAGCTG AGCGGCAGGC GGGATATCCG CTTTTTGAAA
AGTCCGCTAT CAGGCCTGAT CGAGCCCTGC CTGTCGCTCG AGATGCTGCA GAGTTTTGGT
CTGGACTTGA GCCGTCTGCC GCCAGGTGAG GCATCTGCCC AGGCCTGTTT CGACCTGCCC
GCGCGTGTCG CATTTGCCCG CGTCGACTAT CAGCCCGGTG CGTTGCGACT GACGATCAGT
GTGCCGCAAG CGGTGATGTC ACGCGGTGCT CGCGGTTATG TGTCGCCGGA GCTTTGGGAC
CAGGGCGAGA CCGCAGGCTT TATCAACTAC AACTTCAATG GCAGCCGGCG GCGTAACAAG
GGCCTGGAAA CGGAGCAGTA CTACGTGGGG CTGCGAAACG GGCTGAACGT CGGCGCCTGG
CGTTTGCGCA ACGAGTCCTC TCTGGTCGGC GGCAGTGACA GGCCCTGGCG TTATCGCAGC
AATCGTACCT TCGCGCAGCG TGACATCACC ACCCTGAAAA GCCAGCTCAC GCTGGGCGAG
ACGTTCACCG ATTCGCAGGT ATTCGACAGT GTCCGCTTCA GGGGCGCGGC GCTGGCCTCT
GACGATGGCA TGCTGTCTGA CAGCGAGCGG GCCTATGCCC CGGTCATCCG CGGGATTGCC
GAAACCAATG CGACCGTGGA AGTTCGCCAG AACGGCTTTC TGCTCTACAG CGGCAGTGTG
TCGCCCGGGC CGTTCGAGAT TGCCGATATC TATCCCAGTG GCTCCAATGG CGACTTGTCG
GTGTCTGTCA TCGAAGCCGA CGGGCGTGTA AGAACCTTCA CTCAGGCCTA CGCGTCGCTG
CCGATCATGG TTCCCGCAGG CTCGTTGCGC TACAGCCTGG CCGGCGGGCA GGTCGACAAC
AACGACGATC AGCAGGCCTC TCCGGCGTTT GCCAGTGTGG CCCTGATCTA CGGTCTTTCC
GAACGGATTA CCGGGTTTGC CGGGGTGCAA CTGGCCGAGG ATTACCAGGC CGCGAACATA
GGCACCGGGA TCAACACCGG GCTGGGCGCC GTGTCGATGG ACCTTACCCG CTCGGTCAGC
AAGGTGGATC AGCGGGCGCG CAGTGGCCAG AGCCTGCGCG TGCGTTATGC CAATACGCTG
GATGTCACCG ACACCACGTT GGCAGTGGCC GGTTATCGAT ATTCGACCGA GCAATACCGG
ACCCTGAGCC AGCACGTCAG CGACAGCGGC GCGCTGCGGC AATTGCGGGC TTCTGGGCTG
GCGCGGGATC GGCTGGAACT CAGCATCACT CAGATAGTGC CTGGCCAGTC GGCGTCGCTG
AGCCTGACGG CGTCCGAGCA GCGCTACTGG AACCTGTCCG GCAAGACCCG GCAGCTTTAC
CTGTCCTATA ACGCGGCCTG GTATTCGCTC AATTACAGCC TGTCCATCGA ACGCAACGAG
GATTTCGGGC GAAGCGGTGA CGCGAGCACC GACAATCGTG TTGCCCTGAG CGTGACCCTG
CCGCTCGGCT CCAGCCCCGG CTCGTCGCGA CTGTCTTTCA ACGCGGTGCG CGACAGCCGC
GGCGAGTACA ACGCGCAGGC CGGGCTCAAC GGTCAGGTGC CGGGCGACCG CGACACGTTC
TATTCGGTAC AGGCTGGACG TGACAGCAGC TCCGGCAGTT TCGGCGCAGG CAAGGTCAGC
ACCAGCACGG CATTCGGCCG TTTCGAGGCC GGTTATAGCC AGGGCCAGGA CTACGATGCA
TTCAGCCTGT CCGCCGCAGG GTCGCTGGTG GCGCATGCCG GTGGCGTGAA CCTGGGGCAG
ACCTTGGGAG AAACCTTTGC TCTGGTTCAG GTGCCCGACG TCGGTGGCGC CCGCTTGAAG
TCGTTCAGTA ACGTCGAGAC CGCCCGCAAC GGCTATGCGG TTCTGCCCTA TGCGCAGGCC
TACCGCACCA ACTGGGTCAG CCTGGATACC CGGCAACTGG GCGCTGATGT CGATCTGGAA
AACGCTATTA CCCAGATCGT GCCGCGCAGG GGCGCAATAC CGGTGGTGCG CTTCAAGGCC
AATGTGGGCC GCCGGGTCCA GTTCGAACTG GTGCGCGTCG ATGGCAGCAA AGTGCCGCTG
GGTGCCAGTG TCGAAGATGA GCAGGGCAGG GCGCTGGCAG TGGTCGATCC CGGCAGTCAG
GCGCTGGTGC TCAGCGAGCA GGATGCCGGC AGCCTGTGGG TGCGCTGGTC AGATCAACGT
TGCCAGGCGA CATTCTCGTT ACCGCCCAGA GACCCGTCGC GAGCCTACGA GCGGATCAGG
GTGGTATGCC GATGA
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| Protein sequence | MEWRKEVNKG VIAQCALPHP RRGALGIGFG LTLMCAVSAS AASSGGDGAV RFNTAFIQGS
DQPADLQEFL RSNSVLPGIY RVDIYVNRKL SGRRDIRFLK SPLSGLIEPC LSLEMLQSFG
LDLSRLPPGE ASAQACFDLP ARVAFARVDY QPGALRLTIS VPQAVMSRGA RGYVSPELWD
QGETAGFINY NFNGSRRRNK GLETEQYYVG LRNGLNVGAW RLRNESSLVG GSDRPWRYRS
NRTFAQRDIT TLKSQLTLGE TFTDSQVFDS VRFRGAALAS DDGMLSDSER AYAPVIRGIA
ETNATVEVRQ NGFLLYSGSV SPGPFEIADI YPSGSNGDLS VSVIEADGRV RTFTQAYASL
PIMVPAGSLR YSLAGGQVDN NDDQQASPAF ASVALIYGLS ERITGFAGVQ LAEDYQAANI
GTGINTGLGA VSMDLTRSVS KVDQRARSGQ SLRVRYANTL DVTDTTLAVA GYRYSTEQYR
TLSQHVSDSG ALRQLRASGL ARDRLELSIT QIVPGQSASL SLTASEQRYW NLSGKTRQLY
LSYNAAWYSL NYSLSIERNE DFGRSGDAST DNRVALSVTL PLGSSPGSSR LSFNAVRDSR
GEYNAQAGLN GQVPGDRDTF YSVQAGRDSS SGSFGAGKVS TSTAFGRFEA GYSQGQDYDA
FSLSAAGSLV AHAGGVNLGQ TLGETFALVQ VPDVGGARLK SFSNVETARN GYAVLPYAQA
YRTNWVSLDT RQLGADVDLE NAITQIVPRR GAIPVVRFKA NVGRRVQFEL VRVDGSKVPL
GASVEDEQGR ALAVVDPGSQ ALVLSEQDAG SLWVRWSDQR CQATFSLPPR DPSRAYERIR
VVCR
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