Gene Psyr_1122 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_1122 
Symbol 
ID3366616 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp1271448 
End bp1272122 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content63% 
IMG OID637651463 
Productketo-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase 
Protein accessionYP_234214 
Protein GI66044373 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0800] 2-keto-3-deoxy-6-phosphogluconate aldolase 
TIGRFAM ID[TIGR01182] Entner-Doudoroff aldolase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.18136 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACAGA ACGAAAATAA TCAGCCGCTG ACCAGCATGG CGAACAAGAT TGCCCAGATC 
GACGAACTCT GCGCCAAGGC GAAGATTCTG CCGGTGATCA CCATCGCCCG TGACCAGGAC
GTACTGCCGC TGGCCGATGC ACTGGCCGCT GGCGGCATGA CTGCGCTGGA AGTGACCCTG
CGCTCGGCGT TCGGCCTGAG CGCCATTCGT ATCCTGCGTG AACAGCGCCC CGAGTTGTGT
GTGGGCGCGG GGACGATCCT GGACCGCAAG ATGCTGGCCG ACGCCGAAGC GGCCGGTTCG
CAGTTCATCG TGACGCCCGG CAGCACGCAG GAACTCTTGC AGGCGGCGCT CGACAGCCCG
CTGCCTTTGC TACCCGGCAT CAGCAGTGCC TCGGAAATCA TGATCGGCTA CGCCATGGGC
TATCGCCGTT TCAAGCTGTT TCCGGCCGAG ATCAGCGGCG GTGTGGCAGC GATCAAAGCC
CTTGGCGGGC CGTTCAACGA GGTGCGTTTC TGCCCCACTG GCGGCGTTAA TGAGCAGAAC
CTCAAGAGCT ACATGGCCCT GCCCAACGTC ATGTGCGTGG GCGGCACCTG GATGATCGAT
AACGCCTGGG TCAAGAATGG CGACTGGGGG CGTATCCAGG AAGCGACTGC GCAGGCCATG
GCGCTGTTTG ACTGA
 
Protein sequence
MTQNENNQPL TSMANKIAQI DELCAKAKIL PVITIARDQD VLPLADALAA GGMTALEVTL 
RSAFGLSAIR ILREQRPELC VGAGTILDRK MLADAEAAGS QFIVTPGSTQ ELLQAALDSP
LPLLPGISSA SEIMIGYAMG YRRFKLFPAE ISGGVAAIKA LGGPFNEVRF CPTGGVNEQN
LKSYMALPNV MCVGGTWMID NAWVKNGDWG RIQEATAQAM ALFD