Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_1122 |
Symbol | |
ID | 3366616 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 1271448 |
End bp | 1272122 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637651463 |
Product | keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase |
Protein accession | YP_234214 |
Protein GI | 66044373 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0800] 2-keto-3-deoxy-6-phosphogluconate aldolase |
TIGRFAM ID | [TIGR01182] Entner-Doudoroff aldolase |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.18136 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACACAGA ACGAAAATAA TCAGCCGCTG ACCAGCATGG CGAACAAGAT TGCCCAGATC GACGAACTCT GCGCCAAGGC GAAGATTCTG CCGGTGATCA CCATCGCCCG TGACCAGGAC GTACTGCCGC TGGCCGATGC ACTGGCCGCT GGCGGCATGA CTGCGCTGGA AGTGACCCTG CGCTCGGCGT TCGGCCTGAG CGCCATTCGT ATCCTGCGTG AACAGCGCCC CGAGTTGTGT GTGGGCGCGG GGACGATCCT GGACCGCAAG ATGCTGGCCG ACGCCGAAGC GGCCGGTTCG CAGTTCATCG TGACGCCCGG CAGCACGCAG GAACTCTTGC AGGCGGCGCT CGACAGCCCG CTGCCTTTGC TACCCGGCAT CAGCAGTGCC TCGGAAATCA TGATCGGCTA CGCCATGGGC TATCGCCGTT TCAAGCTGTT TCCGGCCGAG ATCAGCGGCG GTGTGGCAGC GATCAAAGCC CTTGGCGGGC CGTTCAACGA GGTGCGTTTC TGCCCCACTG GCGGCGTTAA TGAGCAGAAC CTCAAGAGCT ACATGGCCCT GCCCAACGTC ATGTGCGTGG GCGGCACCTG GATGATCGAT AACGCCTGGG TCAAGAATGG CGACTGGGGG CGTATCCAGG AAGCGACTGC GCAGGCCATG GCGCTGTTTG ACTGA
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Protein sequence | MTQNENNQPL TSMANKIAQI DELCAKAKIL PVITIARDQD VLPLADALAA GGMTALEVTL RSAFGLSAIR ILREQRPELC VGAGTILDRK MLADAEAAGS QFIVTPGSTQ ELLQAALDSP LPLLPGISSA SEIMIGYAMG YRRFKLFPAE ISGGVAAIKA LGGPFNEVRF CPTGGVNEQN LKSYMALPNV MCVGGTWMID NAWVKNGDWG RIQEATAQAM ALFD
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