| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_1101 |
|---|
| Symbol | |
|---|
| ID | 3366595 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | - |
|---|
| Start bp | 1246586 |
|---|
| End bp | 1248094 |
|---|
| Gene Length | 1509 bp |
|---|
| Protein Length | 502 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637651442 |
|---|
| Product | helix-turn-helix, Fis-type |
|---|
| Protein accession | YP_234193 |
|---|
| Protein GI | 66044352 |
|---|
| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
|---|
| COG ID | [COG3283] Transcriptional regulator of aromatic amino acids metabolism |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCATCC ATGTCAGCTT CATCGACCGC GTCGGTATCA CCCAGGAAGT GCTGGCGATT
CTGGGTGGAC GCAATCTGAA TCTGGACGCG GTGGAGATGG TACCGCCCAA CGTGTACATC
GATGCGCCGA CGCTCAGCCA TCAAATGCTC GAAGAGCTCA AGGACGCGCT GTTTCGGGTC
CGTGGTGTGG AAGCGATCAC CGTGGTCGAC ATCCTTCCGG GTCAGCGTCG CCACTTGCAG
CTGGACGCGT TGCTCGCCGC CATGACCGAT CCGGTGCTGG CTCTGGATAG CGCCGGGCAC
GTGCTGCTGG CCAACCCGGC ACTCATTGCA CTGATCGGCA GGGAGCCGGC GGGCGAATCG
ATCGGTGAGC TGTTCAGCGA CCCCAGTCTG CACGTCGCGT TGCTGGAAAA CGGCTTTCGC
CTGCCGCTGC GCGAGATCAC CCTCAATGGT GAAGCACTGC TGCTGGATGC CACGCCGATC
ACCGAGGCCG GCGCGCTGAT TACCCTGTAC CTGCCCAGCC GAATCGGCGA ACGCCTGTCG
GCATTGCACC ATGATCACGC CGAAGGTTTC GACGCTCTGC TCGGCGACTC GGCCGCCATC
CGCACTCTCA AGGCACGCGC GCAACGGGTG GCGGCGCTGG ACGCACCGCT GCTGATTCAG
GGCGAAACCG GCACCGGCAA AGAGTTGGTC GCCCGCGCCT GTCACGCCAG CAGCGCGCGC
CACGGCGAAC CGTTTCTGGC CCTCAACTGC GCGGCTTTGC CGGAGAACCT CGCCGAAAGC
GAACTGTTCG GCTATGCCCC GGGAGCGTTT ACCGGGGCAC AGCGTGGCGG CAAACCGGGA
TTGATGGAGC TGGCCAACCA AGGCAGCGTA TTTCTCGATG AAATCGGCGA AATGTCACCC
TATCTGCAGG CCAAACTGCT GCGTTTTCTC AACGATGGCA GCTTCCGGCG CGTCGGTGGC
GATCGCGAAG TACGGGTCAA TGTGCGCATT CTCAGCGCCA CCCACCGCGA TCTGGAAAAG
ATGGTCAGCG AAGGCACCTT CCGTGAAGAC CTGTTCTACC GCCTTAATGT CCTCAATCTT
GAGGTTCCAC CGTTGCGCGA GCGCGGTCAG GACATTCTGC TGCTGGCCCG ATACTTCATG
GAGCAGGCAT GCGCACAGAT TCAGCGCCCG GTCTGCAGAC TTGCACCCGG CACCTACCCT
GCACTGCTCG GCAACCGCTG GCCAGGCAAT GTGCGGCAAT TACAGAATGT GATTTTTCGC
GCAGCTGCCA TCTGCGAACA CACTCAAGTG GATATAGGCG ACCTGGATAT CGCCGGCACC
GCAGTGGCGC GCCAGAACGA CAGCCCGATC GACAGCCTCG AAAATGCCGT CGAAGCCTTC
GAGCGGAATC TGCTGGAAAA GCTTTACGCG GATTACCCTT CCACCCGCCA ACTGGCCAAT
CGCCTGCATA CTTCGCACAC CGCCATCGCT CATCGCCTGC GAAAATATGG AATTCCTGGC
AAGCGTTAG
|
|---|
| Protein sequence | MRIHVSFIDR VGITQEVLAI LGGRNLNLDA VEMVPPNVYI DAPTLSHQML EELKDALFRV
RGVEAITVVD ILPGQRRHLQ LDALLAAMTD PVLALDSAGH VLLANPALIA LIGREPAGES
IGELFSDPSL HVALLENGFR LPLREITLNG EALLLDATPI TEAGALITLY LPSRIGERLS
ALHHDHAEGF DALLGDSAAI RTLKARAQRV AALDAPLLIQ GETGTGKELV ARACHASSAR
HGEPFLALNC AALPENLAES ELFGYAPGAF TGAQRGGKPG LMELANQGSV FLDEIGEMSP
YLQAKLLRFL NDGSFRRVGG DREVRVNVRI LSATHRDLEK MVSEGTFRED LFYRLNVLNL
EVPPLRERGQ DILLLARYFM EQACAQIQRP VCRLAPGTYP ALLGNRWPGN VRQLQNVIFR
AAAICEHTQV DIGDLDIAGT AVARQNDSPI DSLENAVEAF ERNLLEKLYA DYPSTRQLAN
RLHTSHTAIA HRLRKYGIPG KR
|
|---|
| |