| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_1043 |
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| Symbol | |
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| ID | 3366537 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | - |
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| Start bp | 1178149 |
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| End bp | 1179123 |
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| Gene Length | 975 bp |
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| Protein Length | 324 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637651386 |
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| Product | 2-hydroxyacid dehydrogenase |
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| Protein accession | YP_234137 |
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| Protein GI | 66044296 |
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| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1052] Lactate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.344903 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAA CCGTACTCGC CTTCAGCCGT GTTTCTCCTG AAATGGCCGA GCGCCTGGCG
CAAGACTTCA ACGTGATCGT GCCCAACCCC AAGCAGGGTG ATATCAACGC GCAGTTTGCA
GAAGCCTTGC CTGAATCCCA CGGCCTTATA GGCGCAGGCC GCAAGCTGGG TCGCGAACAA
CTGCAGAGCG CCACAAAGCT GGAGGTGGTG TCCAGCATCT CGGTGGGCTA CGACAACTAC
GACGTCGACT ACCTGAGCGA GCGCGGCATT CTGCTGACCA ACACGCCGGA TGTACTGACC
GAAAGCACCG CCGACCTGGG CTTCTCGCTG ATCATGAGCA GCGCCCGCCG AGTCGCCGAA
CTGGACGCCT ATACCAAGGC CGGACAGTGG ACGCGCAGCA TCGAACCGCC GCACTTCGGC
ACCGATGTGC ATGGCAAGAC GCTGGGTATC GTCGGCATGG GCAACATCGG CGCAGCCATT
GCCCGCCGCG GGCGTCTGGG CTTCAACATG CCGATTCTGT ACGCCGGCAA CAGCCGCAAG
ACCCAACTCG AACAGGAACT GGGCGCACAA TTTCGCAGCC TGGACCAGTT GCTGGCCGAA
GCGGATTTCG TCTGCCTGGT GGTACCGCTG AGCGAAAAGA CCAAGCACTT GATCGGCCGC
CGCGAACTGA GCCTGATGAA GCCCGGCGCA ATCCTGGTCA ACATCGCCCG CGGCCCGATC
GTCGATGAAC CCGCCCTGAT CGAAGCGCTG CAGAACGGCA CCATTCGCGG CGCCGGTCTG
GACGTCTACG AAAAAGAGCC GCTGAGCGAA TCGCCGCTGT TCCAGCTCAA GAACGCGGTG
ACCCTGCCGC ACGTAGGCTC AGCCACCACC GAAACCCGCC AGGCCATGGC CGACCGCGCC
TACGGCAACC TGCGCAGTGC GCTGCTCGGT GAACGACCGC AGGATCTGGT CAACCCGCAG
GTGTGGAAAG GCTGA
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| Protein sequence | MKKTVLAFSR VSPEMAERLA QDFNVIVPNP KQGDINAQFA EALPESHGLI GAGRKLGREQ
LQSATKLEVV SSISVGYDNY DVDYLSERGI LLTNTPDVLT ESTADLGFSL IMSSARRVAE
LDAYTKAGQW TRSIEPPHFG TDVHGKTLGI VGMGNIGAAI ARRGRLGFNM PILYAGNSRK
TQLEQELGAQ FRSLDQLLAE ADFVCLVVPL SEKTKHLIGR RELSLMKPGA ILVNIARGPI
VDEPALIEAL QNGTIRGAGL DVYEKEPLSE SPLFQLKNAV TLPHVGSATT ETRQAMADRA
YGNLRSALLG ERPQDLVNPQ VWKG
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