Gene Psyr_1027 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_1027 
Symbol 
ID3366521 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp1157518 
End bp1158321 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content62% 
IMG OID637651370 
Producthypothetical protein 
Protein accessionYP_234121 
Protein GI66044280 
COG category[S] Function unknown 
COG ID[COG2912] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCCAC GTCAGCATTG CCTGGCCTGC CTGCAACAGA CACCGCCCGC GGTGTTTGAA 
GCTGCGTTAT GGGTGTCGAC CGAACATGAC GCGCACTTCG CCTGGCATGA GGTGATGAGC
GAAATGGACC AGTTGCAGCG CCAGATAAAT TCAGCGCTGC CTGTCCTGCC TGCGCCTGAA
CTTGCCCAGC CGCTGTTGCG GCATCTCAAC GCCCTGGGTT TTCAGCAGGA TGACTGGAAC
CCTCCCAAAC CCGACTCGGC CCTTTTGCAC AAGATCGTGC GGCAGCGTCG AGGCCAGCCA
CTGGGGCTGG CAATGATCGC GCTGGAGATC GCACGACGCC TGGATATCGC ACTGGAAGGC
GTTAACTTCC CGGGTCACTT CCTGCTGCGC GTGCCGGGTG CCGATCACCT GCTCGACCCC
TGCAGCGGGC GCAGGCTCTA TCCCGCCGAT TGCCGCGAGC TGTTGATCCG GCAGTTCGGC
CCGACCATGC AGCTGCGCGC CGAACATATG ACACGCGCCA CCCCGACCAG CATGCTGCAA
CGGTTGTCGC GCAACCTGCG GCACCTGCAC CAGATCAACG ATAATGTCCT CGCGGCGCTC
AAGGATGCCG ACCGCATCGT CGAACTGGGC CAGGCCACCA GCAGCGATCA CCTGGCTCGC
GCCAGTCTGT ATCAGTTTCT TGAATGCCCG CAGGCCGAAC GTTTCGATCT GGAGCGCGCG
CTGTTGCTCA GTGAAGACCC ACTGCAAAGA CTCCAGCTTG CCGAGCGCCT GAGCCATTTA
TCGGTAAACC ACCGCGTTCA TTGA
 
Protein sequence
MTPRQHCLAC LQQTPPAVFE AALWVSTEHD AHFAWHEVMS EMDQLQRQIN SALPVLPAPE 
LAQPLLRHLN ALGFQQDDWN PPKPDSALLH KIVRQRRGQP LGLAMIALEI ARRLDIALEG
VNFPGHFLLR VPGADHLLDP CSGRRLYPAD CRELLIRQFG PTMQLRAEHM TRATPTSMLQ
RLSRNLRHLH QINDNVLAAL KDADRIVELG QATSSDHLAR ASLYQFLECP QAERFDLERA
LLLSEDPLQR LQLAERLSHL SVNHRVH