Gene Psyr_1022 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_1022 
Symbol 
ID3366516 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp1153512 
End bp1154078 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content63% 
IMG OID637651365 
Producthypothetical protein 
Protein accessionYP_234116 
Protein GI66044275 
COG category[S] Function unknown 
COG ID[COG3224] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.830686 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTACCT CACCCGTCAC CTTGATGGTT GCCCGCCGCG TGGCGCAGGG TCGTTACCAT 
GAAATGATGG CCTGGCTGCA CGAAGGCGAA CAGTTGGCCA CGGACTTTCC GGGGTATCTG
GGTTCAGGGG TACTGGCCCC CCCGCCCGGC GATGACGAAT TTCAGATCAT TTTCCGCTTC
ACCGATGAGC ACACCATGCA CGCCTGGGAG CATTCCGCCT CTCGGCGCTC CTGGCTGGTG
CGCGGCAGCG GTCTTTTCGC ACAACCCTCG GAGCATCGGG TCAGCGGTAT CGACGGCTGG
TTCGGCGCAA TCGATCAGCG CCCGCCACGC TGGAAACAGG CCGTCGCGAT CTGGCTGGCG
TTCTTCCCCG TGTCGCTGAT CTTCAACTTT CTGCTGGGCC CGTTGCTCAA TCATCTGGAC
CTGTTGCCGC GCATCATGAT CAGCACCGCG GTGCTCACCC CGCTGATGGT CTACCTGTTC
ATCCCGCTGT CCACGCGCCT GCTGGCACCC TGGCTACAGA GCACGCCTGC ACCGGCACGC
CCGACGCAAT CACCTTCCCC TCGCTAA
 
Protein sequence
MSTSPVTLMV ARRVAQGRYH EMMAWLHEGE QLATDFPGYL GSGVLAPPPG DDEFQIIFRF 
TDEHTMHAWE HSASRRSWLV RGSGLFAQPS EHRVSGIDGW FGAIDQRPPR WKQAVAIWLA
FFPVSLIFNF LLGPLLNHLD LLPRIMISTA VLTPLMVYLF IPLSTRLLAP WLQSTPAPAR
PTQSPSPR