Gene Psyr_0989 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0989 
Symbol 
ID3366483 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp1119347 
End bp1119979 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content64% 
IMG OID637651332 
Productlysine exporter protein LysE/YggA 
Protein accessionYP_234083 
Protein GI66044242 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID[TIGR00949] The Resistance to Homoserine/Threonine (RhtB) Family protein 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACTGGG CAGAATTTCT TACCGTTGCG CTGATTCACT TGCTGGCGGT TGCCAGCCCC 
GGTCCGGATT TCGCGGTGGT GGTGCGTGAA AGCGTCACTC ATGGGCGCAA GGCAGGGACC
TGGGCGGCGT TGGGCGTCGG CTCGGCGATC TTTCTGCATG TGGGGTATTC GCTGCTGGGG
ATCGGGATTA TCGTCTCCCA GTCCATCGTG CTGTTCAACG CGCTGAAATG GGCAGCCGCG
GCCTATCTAC TGTACATCGG CATCAAGGCG TTGCGCGCCA AACCAGCCGC TGCAACGGGG
GATACCGCCA TCAAGGCCAC TCCCGGCGAG CGCACGGCAC GCGGTGCCTA CATCAGCGGT
TTCGTCACCA ATGGCCTGAA TCCCAAGGCG ACGCTGTTCT TCCTCTCGCT GTTCACCGTG
GTGATCAATC CGCACACGCC ACTGCTGGTG CAGGGCGGTT ACGGCGTGTA CCTCGCAGTG
GCGACGGCGG CGTGGTTCTG TCTGGTGGCG CGACTGTTCA GCCAGGCCCG GGTGCGCGCA
GGATTCGCGC GCATGGGGCA CTGGTTCGAC CGGGCCATGG GCGGCGTGCT GATCGCGCTG
GGCATCAAGC TGGCGCTGAC CGAAGTGCGC TGA
 
Protein sequence
MYWAEFLTVA LIHLLAVASP GPDFAVVVRE SVTHGRKAGT WAALGVGSAI FLHVGYSLLG 
IGIIVSQSIV LFNALKWAAA AYLLYIGIKA LRAKPAAATG DTAIKATPGE RTARGAYISG
FVTNGLNPKA TLFFLSLFTV VINPHTPLLV QGGYGVYLAV ATAAWFCLVA RLFSQARVRA
GFARMGHWFD RAMGGVLIAL GIKLALTEVR