Gene Psyr_0965 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0965 
Symbol 
ID3366459 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp1098294 
End bp1099280 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content64% 
IMG OID637651308 
Productamine oxidase, flavin-containing 
Protein accessionYP_234059 
Protein GI66044218 
COG category[R] General function prediction only 
COG ID[COG3380] Predicted NAD/FAD-dependent oxidoreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGTCC CTATCGCAAT CATTGGTACC GGTATCGCCG GACTCTCAGC AGCCCAGGCG 
CTTACAGCCG CCGGGCATCA GGTGCACCTT TTCGACAAGA GCCGCGGCAG CGGCGGTCGT
ATGTCCAGCA AGCGCAGCGA CGCAGGTTCG CTGGACATGG GCGCACAGTA TTTCACCGCC
CGTGACCGGC GCTTTGCCAC TGCAGTCAAG CAGTGGCAAA CCCAGGGCCA CGTCGCCGAG
TGGACACCCT CGCTCTACAA CTTTCATGGC GGCAGACTCA GCCCTTCACC GGATGAGCAA
GTGCGCTGGG TGGGTACGCC TGGCATGAGC GCTATTACCC GGGCGATGCG CGGCGATCTG
CCAGTGTCGT TCTCGTGCCG GATCACTGAA GTGTTTCGCG GCGAACAACA CTGGAACCTG
CTTGATGCCG AAGGCGAAAG CCACGGCCCT TTCAGCCATG TGATCATCGC CACCCCGGCC
CCTCAGGCCA CTGCCCTGCT GGCTGCCGCG CCAAAACTGG CAAGCGTCGT GGCAGGCGTG
AAGATGGACC CGACCTGGGC TGTGGCGCTG GCCTTCGAAA CCCCATTGCA GACGCCCATG
CAGGGTTGCT TCGTGCAGGA CAGCCCGCTG GACTGGCTGG CCCGCAACCG CAGCAAACCC
GGGCGCGACG CCACGCTCGA TACTTGGGTA CTGCACGCCA CCAGCCAGTG GAGCCAGCAG
AATATCGACG CCTCCAGAGA ACAGGTCACC GAACAGTTGC ACGGCGCCTT CGCGGAATTG
ATCGATTGCA CCATGCCCGC GCCAGTGTTC AGCCTCGCGC ATCGCTGGCT GTATGCACGG
CCTGCCGGCT CTCACGAATG GGGCGCTCTG TCGGATGCCG ATCTGGGCAT TTACGTGTGC
GGCGACTGGT GCCTGTCCGG ACGCGTGGAA GGTGCCTGGC TGAGTGGTCA GGAAGCCGCG
CGTCGATTGC TGGAACACGT GCAATGA
 
Protein sequence
MTVPIAIIGT GIAGLSAAQA LTAAGHQVHL FDKSRGSGGR MSSKRSDAGS LDMGAQYFTA 
RDRRFATAVK QWQTQGHVAE WTPSLYNFHG GRLSPSPDEQ VRWVGTPGMS AITRAMRGDL
PVSFSCRITE VFRGEQHWNL LDAEGESHGP FSHVIIATPA PQATALLAAA PKLASVVAGV
KMDPTWAVAL AFETPLQTPM QGCFVQDSPL DWLARNRSKP GRDATLDTWV LHATSQWSQQ
NIDASREQVT EQLHGAFAEL IDCTMPAPVF SLAHRWLYAR PAGSHEWGAL SDADLGIYVC
GDWCLSGRVE GAWLSGQEAA RRLLEHVQ