Gene Psyr_0952 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0952 
Symbol 
ID3366446 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp1087574 
End bp1088389 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content60% 
IMG OID637651295 
Productglutamate racemase 
Protein accessionYP_234046 
Protein GI66044205 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0796] Glutamate racemase 
TIGRFAM ID[TIGR00067] glutamate racemase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.44485 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTGACG TGCATATGAG CCATGGCGGC GATGCACCGG TCGGAATCTT CGATTCCGGG 
GTCGGTGGTC TGTCGGTGCT CAATGAAATC CGCCAGCTGT TGCCCAGCGA GTCGCTGCTG
TATCTGGCGG ACTGCGGGCA CATTCCCTAC GGTGAAAAGA CTCCCGAATT TATCATCGAG
CGATGCCTGA CGATTGCCGG GTTTTTCCGC GAGCAGGGGG CCAAGGCGCT GGTCGTCGCC
TGCAACACGG CTACTGCCGC AGGTGTGTCG CATATACGTC AGCGCTACCC GGACTGGCCG
ATTGTCGGTA TGGAGCCAGC GGTCAAACCG GCTGCCGAGG CGACCCGCAG CGGCGTTGTC
GGTGTGCTGG CGACTACCGG AACGCTACAA AGCGCCCGCT TTGCGGCCTT GCTGGACCGT
TTTGCCAACG ATGTGCGGGT CGTGACCCAG CCGTGCCCCG GGCTGGTCGA GCTGATCGAA
ACCGGCGACC TGGTCAGTCC GCAAATCCGT CAACTGCTGC AGCATTATGT CGAGCCGTTG
CTGGCAGCGC GCTGTGACAC GATCATCCTG GGCTGTACTC ATTACCCGTT TCTCAAGCCA
TTGCTGCGCG AAATGCTCCC CGAATCGGTC ACCCTGATCG ATACCGGAGC CGCAGTGGCG
CGGCAACTGC AGCGTCTCTT GACGCGGTCC GGCCTGCTTG CTAGTGGTGT CGCCCGGGAC
ACTGTGTATT GGTCTAGTGA CATACCGGAC AATTTCAGAA AAATCCTACC TTTTTTGTCG
CAAAACGTCG GCAATGTGAG AAGCTTCCGT TTGTAA
 
Protein sequence
MLDVHMSHGG DAPVGIFDSG VGGLSVLNEI RQLLPSESLL YLADCGHIPY GEKTPEFIIE 
RCLTIAGFFR EQGAKALVVA CNTATAAGVS HIRQRYPDWP IVGMEPAVKP AAEATRSGVV
GVLATTGTLQ SARFAALLDR FANDVRVVTQ PCPGLVELIE TGDLVSPQIR QLLQHYVEPL
LAARCDTIIL GCTHYPFLKP LLREMLPESV TLIDTGAAVA RQLQRLLTRS GLLASGVARD
TVYWSSDIPD NFRKILPFLS QNVGNVRSFR L