Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_0952 |
Symbol | |
ID | 3366446 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 1087574 |
End bp | 1088389 |
Gene Length | 816 bp |
Protein Length | 271 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637651295 |
Product | glutamate racemase |
Protein accession | YP_234046 |
Protein GI | 66044205 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0796] Glutamate racemase |
TIGRFAM ID | [TIGR00067] glutamate racemase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.44485 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTTGACG TGCATATGAG CCATGGCGGC GATGCACCGG TCGGAATCTT CGATTCCGGG GTCGGTGGTC TGTCGGTGCT CAATGAAATC CGCCAGCTGT TGCCCAGCGA GTCGCTGCTG TATCTGGCGG ACTGCGGGCA CATTCCCTAC GGTGAAAAGA CTCCCGAATT TATCATCGAG CGATGCCTGA CGATTGCCGG GTTTTTCCGC GAGCAGGGGG CCAAGGCGCT GGTCGTCGCC TGCAACACGG CTACTGCCGC AGGTGTGTCG CATATACGTC AGCGCTACCC GGACTGGCCG ATTGTCGGTA TGGAGCCAGC GGTCAAACCG GCTGCCGAGG CGACCCGCAG CGGCGTTGTC GGTGTGCTGG CGACTACCGG AACGCTACAA AGCGCCCGCT TTGCGGCCTT GCTGGACCGT TTTGCCAACG ATGTGCGGGT CGTGACCCAG CCGTGCCCCG GGCTGGTCGA GCTGATCGAA ACCGGCGACC TGGTCAGTCC GCAAATCCGT CAACTGCTGC AGCATTATGT CGAGCCGTTG CTGGCAGCGC GCTGTGACAC GATCATCCTG GGCTGTACTC ATTACCCGTT TCTCAAGCCA TTGCTGCGCG AAATGCTCCC CGAATCGGTC ACCCTGATCG ATACCGGAGC CGCAGTGGCG CGGCAACTGC AGCGTCTCTT GACGCGGTCC GGCCTGCTTG CTAGTGGTGT CGCCCGGGAC ACTGTGTATT GGTCTAGTGA CATACCGGAC AATTTCAGAA AAATCCTACC TTTTTTGTCG CAAAACGTCG GCAATGTGAG AAGCTTCCGT TTGTAA
|
Protein sequence | MLDVHMSHGG DAPVGIFDSG VGGLSVLNEI RQLLPSESLL YLADCGHIPY GEKTPEFIIE RCLTIAGFFR EQGAKALVVA CNTATAAGVS HIRQRYPDWP IVGMEPAVKP AAEATRSGVV GVLATTGTLQ SARFAALLDR FANDVRVVTQ PCPGLVELIE TGDLVSPQIR QLLQHYVEPL LAARCDTIIL GCTHYPFLKP LLREMLPESV TLIDTGAAVA RQLQRLLTRS GLLASGVARD TVYWSSDIPD NFRKILPFLS QNVGNVRSFR L
|
| |