Gene Psyr_0948 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0948 
SymbolhemA 
ID3366442 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp1083627 
End bp1084904 
Gene Length1278 bp 
Protein Length425 aa 
Translation table11 
GC content61% 
IMG OID637651291 
Productglutamyl-tRNA reductase 
Protein accessionYP_234042 
Protein GI66044201 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0373] Glutamyl-tRNA reductase 
TIGRFAM ID[TIGR01035] glutamyl-tRNA reductase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCTTCC TTGCACTCGG TATCAACCAT AAGACCGCCT CGGTCGACGT TCGCGAGCGT 
GTGGCATTTA CCCCGGAACA GCTGGTCGAG GCATTGCAGC AGCTCTGCCA ACTGACGCAA
AGCCGCGAGG CTGCGATCCT TTCGACCTGC AACCGCAGCG AGTTGTACAT CGAACACGAG
CACCTTGGCG CGGACAGTAT TCTTGCCTGG CTGGCCAATT ATCATCACCT CAGTCTTGAA
GAATTGCGTG CCAGTGCTTA CGTGCACGAA GATGACGCTG CCGTGCGGCA CATGATGCGT
GTCGCCTCGG GGCTCGATTC GCTGGTGCTC GGCGAGCCGC AGATTCTCGG CCAGATGAAG
TCCGCCTACG CGGTTGCCCG CGAAGCCGGC ACGGTCGGGC CGTTGCTTGG TCGACTGTTT
CAGGCGACGT TCAGCGCTGC CAAACAGGTA CGTACCGACA CTGCCATTGG CGAAAACCCG
GTCTCTGTGG CCTTTGCTGC AGTCAGCCTG GCGAAACAGA TTTTCAGTGA CCTGCAACGC
AGCCAGGCCT TGTTGATCGG TGCAGGCGAG ACCATTACTC TGGTCGCCCG GCATCTGCAT
GATCTGGGCG TCAAGCGTAT CGTGGTCGCC AACCGCACGC TGGAACGCGC CAGCATGCTC
GCCGCCGAGT TCGGTGCGCA CGCGGTGCTG CTGTCGGACA TCCCGGCGGA ACTGGTCAAC
AGCGATATCG TGATCAGCTC CACCGCCAGC CAGTTGCCAA TTCTGGGCAA GGGCGCCGTG
GAAAGTGCGT TGAAGCTGCG CAAGCACAAA CCGATTTTCA TGGTCGATAT CGCCGTACCG
CGGGATATTG AGCCTGAAGT CGGCGAGCTG GACGATGTTT ACCTGTACAG CGTTGATGAC
CTGCATGAAG TGGTGGCAGA GAATCTCAAG AGCCGTCAGG GCGCGGCGCT GGCCGCCGAG
CAGCTGGTCA GCGTGGGTGC CGAGGACTTC ATGTCGCGCT TGCGCGAACT GGCCGCAGTC
GACGTGCTGC GTGCCTATCG TCAGCAAAGC GAACGGCTGC GTGACGAAGA GCTGAGCAAG
GCGCAACGTA TGCTGGCCAA CGGCAGCAAT GCCGAGGACG TACTGATCCA GCTGGCGCGT
GGCCTGACCA ACAAATTGCT GCATGCACCC AGCGTGCAGC TCAAGAAGCT GTCTGCCGAA
GGTCGCGTCG ATGCGCTGGC CATGGCCCAG GAACTTTTTG CCCTCGGTGA GGGCTCGACG
GATAAACCCC CGCAATGA
 
Protein sequence
MAFLALGINH KTASVDVRER VAFTPEQLVE ALQQLCQLTQ SREAAILSTC NRSELYIEHE 
HLGADSILAW LANYHHLSLE ELRASAYVHE DDAAVRHMMR VASGLDSLVL GEPQILGQMK
SAYAVAREAG TVGPLLGRLF QATFSAAKQV RTDTAIGENP VSVAFAAVSL AKQIFSDLQR
SQALLIGAGE TITLVARHLH DLGVKRIVVA NRTLERASML AAEFGAHAVL LSDIPAELVN
SDIVISSTAS QLPILGKGAV ESALKLRKHK PIFMVDIAVP RDIEPEVGEL DDVYLYSVDD
LHEVVAENLK SRQGAALAAE QLVSVGAEDF MSRLRELAAV DVLRAYRQQS ERLRDEELSK
AQRMLANGSN AEDVLIQLAR GLTNKLLHAP SVQLKKLSAE GRVDALAMAQ ELFALGEGST
DKPPQ