| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_0937 |
|---|
| Symbol | |
|---|
| ID | 3366430 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | + |
|---|
| Start bp | 1072797 |
|---|
| End bp | 1074215 |
|---|
| Gene Length | 1419 bp |
|---|
| Protein Length | 472 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637651281 |
|---|
| Product | mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase |
|---|
| Protein accession | YP_234033 |
|---|
| Protein GI | 66044192 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0662] Mannose-6-phosphate isomerase
[COG0836] Mannose-1-phosphate guanylyltransferase |
|---|
| TIGRFAM ID | [TIGR01479] mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.218624 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCACCC CTGTAATCCT GGCTGGCGGT AGTGGTTCGC GGTTATGGCC TTTGTCGCGG
CAGAGTTTCC CGAAGCAGTT TCTTGCCCTT GATGGCCAGG ATCAGGGAAC CATGTTTCAA
CGCACACTGG CTCGCCTGAA AGGCCTTGAA CACGCGCCTG CGGTTGTTGT GAGCAACGAA
AATCACCGCT TCATCGTCGC CGAGCAGCTA CGTGTTGCGA AGATGGGCAG TCGTCGTGTC
ATCCTCGAGC CGCTCGCCCG CAACACTGCG CCGGCCATCG CCTTGGCTGC GCTCGAAGCA
ACGGCTGATG GCACTGACCC GATCCTGCTG GTACTGGCTG CCGATCACCA TATCCACGAC
GAAGAAGCTT TCCGACAAGC GGTAGCGGTT GCTCAGGTGC ACGCCGAGGC GGGTCGCCTG
GTGACGTTCG GGATTACCCC GACTCACGCT GAAACCGGTT TTGGCTACAT CCACTGTGGT
GAATCCATTG CTCAGGGTGG CTTCGCAATC GAGGCGTTCA AGGAGAAGCC TTCGCCGGAA
ATGGCTGCCG AATACCTGTC CTCGGGTGCT TACCTGTGGA ACAGCGGTAT GTTCATGTTC
CGTGCCTCGG TGTTCCTGGC TGAGCTGAAA AAGCATCGTT CCGACATATT GTCTGCATGC
CGCGTAGCCT TGGCTGACTC CGATGCCGAC AGCTACTTCC TGCACGTCTC GGCCGAGAAG
TTTGCCTTGT GCGCCGATGA GTCCGTGGAC TACGCGGTCA TGGAGCACAC CGATCTCGGT
CTGGTCGTAC CTTTGGACGC AGGCTGGAAC GATCTGGGCA GTTGGGCAGC GATCTGGGAC
GTGGGCCCGC ACGACGAGAA TGTCAATCGC CTGGAAGGCG ACGTGATGGC CATCGACACG
CGCAACTGCC TGGTGCAGTC GCACCATCGA CTGGTGGCCA CCGTCGGCGT CGAGGACCTG
ATCGTCATCG AAACCAAGGA CGCCGTTCTG GTTGCCAACA AGCACAACAG CCAGCAGGTC
AAGGACGTGG TCAAGCGTCT GCAGGCAGAA GAGCGCCCTG AGTTCGTTAC TCATCCACTG
GTCAACCGCC CGTGGGGCCA CTACGACACG ATCGATCTCG GCGAGCGTTA TCAGGTCAAG
CGCATCAGCG TACTGCCAGG CGAGTGCCTG TCGCTGCAGA TGCACTATCA CCGCGCCGAG
CACTGGATCG TTGTATCCGG TACTGCCAAG GTTATCTGCG ACGACAAGGA ACTGATCCTT
TCCGAGAATC AGTCCACTTA CATCCCGCTG GGCGTCAAGC ACTCGCTGGC CAACCCCGGC
AAGGTGCCGC TGGAGCTGAT CGAAGTGCAG TCCGGCTCGT ACCTGGGCGA AGACGACATC
GTGCGCTTTG AAGACCGTTA CGGTCGTTTG AAGAAGTAA
|
|---|
| Protein sequence | MFTPVILAGG SGSRLWPLSR QSFPKQFLAL DGQDQGTMFQ RTLARLKGLE HAPAVVVSNE
NHRFIVAEQL RVAKMGSRRV ILEPLARNTA PAIALAALEA TADGTDPILL VLAADHHIHD
EEAFRQAVAV AQVHAEAGRL VTFGITPTHA ETGFGYIHCG ESIAQGGFAI EAFKEKPSPE
MAAEYLSSGA YLWNSGMFMF RASVFLAELK KHRSDILSAC RVALADSDAD SYFLHVSAEK
FALCADESVD YAVMEHTDLG LVVPLDAGWN DLGSWAAIWD VGPHDENVNR LEGDVMAIDT
RNCLVQSHHR LVATVGVEDL IVIETKDAVL VANKHNSQQV KDVVKRLQAE ERPEFVTHPL
VNRPWGHYDT IDLGERYQVK RISVLPGECL SLQMHYHRAE HWIVVSGTAK VICDDKELIL
SENQSTYIPL GVKHSLANPG KVPLELIEVQ SGSYLGEDDI VRFEDRYGRL KK
|
|---|
| |