Gene Psyr_0890 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0890 
Symbol 
ID3366382 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp1011768 
End bp1012115 
Gene Length348 bp 
Protein Length115 aa 
Translation table11 
GC content53% 
IMG OID637651233 
Producttoxin ChpB 
Protein accessionYP_233986 
Protein GI66044145 
COG category[T] Signal transduction mechanisms 
COG ID[COG2337] Growth inhibitor 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAACGGG TTAAATTCAA CCGGTCGGAT ATTGTGCGAC TGAACCTGAA TCCAACCGCA 
GGCCGTGAAC AACAGGGCGA TTTTCGTCCA GCGTTGATTC TGACGCCTGC GGCTTATAAC
GCATCGGGCC TTGTAATTAT TGTACCCATC ACGCAGGGCG GCGACTTCGC TCGGTATGCC
GGTTTCGCGG TGCCTTTAAG CGGTTCAGGT ACCGAAACGC AGGGTGTCGT TCTTTGCAAC
CAGATTCGAA CCGTTGACCT TGAGGCTCGT GGCGCAAAGC GTGTTGAGTC AGTTCCCGAG
ATGATAATCG ACGATGTGCT GGCTCGCGTT CAAGCCCTTT TTGAATAG
 
Protein sequence
MKRVKFNRSD IVRLNLNPTA GREQQGDFRP ALILTPAAYN ASGLVIIVPI TQGGDFARYA 
GFAVPLSGSG TETQGVVLCN QIRTVDLEAR GAKRVESVPE MIIDDVLARV QALFE