Gene Psyr_0872 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0872 
Symbol 
ID3366364 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp994272 
End bp995843 
Gene Length1572 bp 
Protein Length523 aa 
Translation table11 
GC content64% 
IMG OID637651215 
Productalkaline phosphatase 
Protein accessionYP_233968 
Protein GI66044127 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3540] Phosphodiesterase/alkaline phosphatase D 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.406207 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.886958 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGATT TCAACCCGGA CCGTCGACGC ATCATTACCG GAGTCGCCGG TGCCACATTA 
CTGTCGATCC TCAGCCCGTT TGCGCGCAGC GCGGGGGTCG ATTACCCGTT CGCGCTCGGC
GTGGCGTCTG GCGATCCGTT GCCGGACGGC TTCGTGATAT GGACACGCCT GGCGCCCAAG
GTGATGACGC CCTCGGGCGA TGGCGGGCTG AACAAACCCG TTGAGGTGCG CTGGAAGATC
GCCAGCGATG CGGCCATGGT TCACGTAGTC CGCACAGGAC AGGCCACCGC CCACCCGCGC
CTTGCCCATT CGGTGCATGT CGAAGTAAGC GGCTTGCAGC CTGGGCGTCC TTATTGGTAT
CAGTTCGAGA GCCTGGGGGC GCAAAGCGCT GTCGGTCAGG CCTGCACTGC ACCGCTGGCA
AGCGCGATGG TCTCGGCGCG GTTTGGCTTC GTGTCGTGTT CACACTGGGA AGCCGGATAC
TTCAGCGCCT ATCGACACCT GGCCGCGGAG CGCCCGGATC TGGTGTTCTT TCTTGGCGAC
TACATCTATG AGATGAACGT ATCCTCGGAA AGCCCTCGGT TCCCGCGTCA CCACGCGACA
CCTGACCCCA TGGACCTGGC GGGCTATCGC AACCGATACG CGCAGTACAA GACCGACCCC
GACCTGCAAG CGCTGCATGC CTGTGCGCCG AGCGTCGCCA CCTGGGACGA CCATGAAGTG
CAAAATGACT ACGCCGCCCA GTGGTCCCAG GACCCCGACG TGCCGGTGGA CAGCTTTCTG
CGCCGCAGGG CCGCCGCCTA CCAGGCGTTT TACGAACACA TGCCGTTGCG CGCCAGCAGC
CTGCCCAAAG GACAGGAAAT GCGTATCTAC CGCAACCTCG ACTATGGGCG TCTGGCACGT
TTTCACGTGC TGGACGGTCG ACAGTACCGC TCCGAGCAAC CCTGCATCCA GGCCAACGGC
AGCCGTCGAG GTCACGTCGC GCCCAGCGAC TGCCCGGATC TGCGTGACCC GAAACGCACC
ATGCTCGGTT GGGAACAGGA AACCTGGCTG GACCGCAGCT TCGCCGAGTC TCCCGGACAG
TGGAATGTCA TTGCCCAGGA TTTGCTGGTC GCGCCACTGG AACAGCGCGA TCTCAAGACC
CAGGCGCAGG GCCACTGGAC CGACGGCTGG GACGGCTACA TGACCACCCG CGAGCGCGTG
CTGGCCTCCC TGCAACGCCA CCAGACCCGC AACCCGGTGT TCTGGGGTGG CGATATCCAT
TCGTTCTGGA CCACCGACCT GCACGCCGAC GCCGGCAATC CGGATTCAGC CATCGTCGCC
ACCGAATTCG TCGGCACTTC GGTAACCTCC AGCGGGCCAC CGTTCGACGC CTTCAACAGC
ATTCTCGGCC TCAACCCACA CGTGAAGTTC TTCGACAGCC GTCAACGCGG CTACGTGGCA
GTCGACCTGA ACGAACAGCA CATGCAGACC CGCTTTCAAG TGGTGTCGGA TGTGCTGGAC
CCTGCGGCGA GCTTGTCGAC GCTGAAGCGT TTTGTGGTGG AGGCTGGCAA GGCGGGGGCT
GTTGCGGTGT GA
 
Protein sequence
MTDFNPDRRR IITGVAGATL LSILSPFARS AGVDYPFALG VASGDPLPDG FVIWTRLAPK 
VMTPSGDGGL NKPVEVRWKI ASDAAMVHVV RTGQATAHPR LAHSVHVEVS GLQPGRPYWY
QFESLGAQSA VGQACTAPLA SAMVSARFGF VSCSHWEAGY FSAYRHLAAE RPDLVFFLGD
YIYEMNVSSE SPRFPRHHAT PDPMDLAGYR NRYAQYKTDP DLQALHACAP SVATWDDHEV
QNDYAAQWSQ DPDVPVDSFL RRRAAAYQAF YEHMPLRASS LPKGQEMRIY RNLDYGRLAR
FHVLDGRQYR SEQPCIQANG SRRGHVAPSD CPDLRDPKRT MLGWEQETWL DRSFAESPGQ
WNVIAQDLLV APLEQRDLKT QAQGHWTDGW DGYMTTRERV LASLQRHQTR NPVFWGGDIH
SFWTTDLHAD AGNPDSAIVA TEFVGTSVTS SGPPFDAFNS ILGLNPHVKF FDSRQRGYVA
VDLNEQHMQT RFQVVSDVLD PAASLSTLKR FVVEAGKAGA VAV