Gene Psyr_0862 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0862 
Symbol 
ID3366354 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp981424 
End bp983445 
Gene Length2022 bp 
Protein Length673 aa 
Translation table11 
GC content61% 
IMG OID637651205 
Productacyltransferase 3 
Protein accessionYP_233958 
Protein GI66044117 
COG category[I] Lipid transport and metabolism 
COG ID[COG1835] Predicted acyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.587252 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCATCC CTCACAACCC GGCGCTCGGC TATCGACCCG AGATCGATGG CCTGCGCGCG 
CTCGCGGTCA TCCCGGTCAT TCTGTTCCAC GCGGGCATGC CGCTGTTCAG CGGCGGATTC
GTGGGCGTCG ACATCTTTTT TGTGATCTCC GGCTATCTGA TCACTTCGAT CATCCTCGCG
GAGAAGATAA GAGGCCGGTT CTCGCTGATC AACTTTTATG AACGACGCGC GCGGCGCATC
CTGCCTGCGC TGTTCGTGGT GATGCTGATC TGCCTGCCTG TCGCGTGGTT GACGCTCGAT
CCGTCGGACC TGAAATACTT CGCCAAGAGT CTGGTGGCGG TGCCGACCTT TTCATCCAAC
GTGCTGTTCT GGCTGGAAAG CGGCTATTTC GACGCCACGG CAGAACTCAA ACCGCTGTTG
CATACCTGGA CGCTCGCGGT GGAGGAACAG TATTACCTGT TCTTCCCGCT GCTCTTGATG
CTGGCCTGGG GCCTGGGCCG CAAGAGGTTG ATCGTGCTGC TGATGGCCGT CGCCCTGGCC
AGCCTGGCGC TGGCGCAACT GGGCGCCCAT CAAGACACCA GCAACGCGTT TTATCTGCTG
CCGGCACGCG CCTGGGAATT GCTGGCGGGC TCGTTTATCG CCTTCTATTT TGCATGGCGA
CCGCGCAGCA TCGGGCGCGC GAGCGCTGTA GATCAGGCGG CGACTTTACT GGGGCTTTTG
CTGATCGGTT ATGCCGTGAT CGGTTTCGAC AGCAGCACGC CCTTCCCCGG CCTTAATGCA
CTGGTGCCCG TACTGGGCGC GGTGTTGATC ATCGTCTTCG CCCATGGCAA GACTTGGGTT
GGAAGAGCGC TGAGTTCACG TGTGCCCGTC GCGATCGGTA TGCTCAGCTA CAGCGCCTAC
CTGTGGCATC AGCCCGTCTT TGCCTTTGCC CGCCAGTACA ACCTGACTGA GCCGGGCCTG
CCGTTCATGC TGGCGCTTAC CCTTGTGTCT CTGGTGCTGG CCTGGCTGAG CTGGCGTTTC
GTCGAGCAGC CGTTTCGCAA GGCCGGCACC TTCAATCGCG GTCAGATTTT CACCACGGCA
GGCGCCGCCT CCACATTCTT TGTCGCGCTG GGGCTGCTCG GCTATGTGAA TAACGGCTTT
CCCCAGCGTT TCGCCGTCGA TCCGGAGTTG CATCAGGCAT TCGCCGACCC GTTGATACGC
GACAAATGCG ACCAGCCACT GGCCGGCAAA GGCGGCAAAG TCGATTTTTG CCTGTTCGGA
CTCGCTGACG ATCAGGCCGC GCCGGAAATG GCGCTGTTCG GCGACAGCCA TTCTGAAGCG
CTGTTATCGA CGTTCGACGC CGCCGCCCGG GATCAGGGCA GAACCCTCGC GCACATCGGT
CTGGGCGGCT GCCTGCCCTT GCTCGGCGTG GACGTGGCCA ACGGCAACTA CGCTGCCGGG
GTCTGCGAAG CGCTGGCCGA TCGGGAATTC GACTACGTGA AGCGGCAGCG GATCAAAAAG
GTCGTGCTGG TGGCGCGCTG GACGCTGTAT ACCGGCGACG ACTACAGCGA GAGGACGATG
AGCAAGTATT TCCTGACCTC GCGCGCCGAT CCGCAGAAAA GCCGGGAAAC CTCGCGCAGG
GTATTCAGCC AGGCCCTTGA ACACACGATC GAGGCCTACC GCAGTATCGG CGCCGAGGTG
TTCATCGTTG CGCAGGTGCC GCAGCAAATG ATCAACCCTG AAAGTCTCTA CTATCGCTTG
GCGCGCGACG CTTCGGACAG CGATGAGCAG GCATTAAAGC GGGTCAGCGA ACTGTCGGTG
CCGATGGACA AACACGACCT GTTGCAGCGT TTCACCCGCC AGCTGTTCCT GCGTGCCAGC
CAATCGAAAC ACATCAGCCT GATCACGCTG GATGACGCGT TCTGCAAGGA CAGGCAATGC
CTGATCGGCG ACCTGCATTC GTACTACAAG GACTTCAACC ACCTCAACGC CCGGGGTGCG
GGGCTGCTTG TCGGCCAGAT CAGCCATATT CTTGATCAGT GA
 
Protein sequence
MGIPHNPALG YRPEIDGLRA LAVIPVILFH AGMPLFSGGF VGVDIFFVIS GYLITSIILA 
EKIRGRFSLI NFYERRARRI LPALFVVMLI CLPVAWLTLD PSDLKYFAKS LVAVPTFSSN
VLFWLESGYF DATAELKPLL HTWTLAVEEQ YYLFFPLLLM LAWGLGRKRL IVLLMAVALA
SLALAQLGAH QDTSNAFYLL PARAWELLAG SFIAFYFAWR PRSIGRASAV DQAATLLGLL
LIGYAVIGFD SSTPFPGLNA LVPVLGAVLI IVFAHGKTWV GRALSSRVPV AIGMLSYSAY
LWHQPVFAFA RQYNLTEPGL PFMLALTLVS LVLAWLSWRF VEQPFRKAGT FNRGQIFTTA
GAASTFFVAL GLLGYVNNGF PQRFAVDPEL HQAFADPLIR DKCDQPLAGK GGKVDFCLFG
LADDQAAPEM ALFGDSHSEA LLSTFDAAAR DQGRTLAHIG LGGCLPLLGV DVANGNYAAG
VCEALADREF DYVKRQRIKK VVLVARWTLY TGDDYSERTM SKYFLTSRAD PQKSRETSRR
VFSQALEHTI EAYRSIGAEV FIVAQVPQQM INPESLYYRL ARDASDSDEQ ALKRVSELSV
PMDKHDLLQR FTRQLFLRAS QSKHISLITL DDAFCKDRQC LIGDLHSYYK DFNHLNARGA
GLLVGQISHI LDQ