Gene Psyr_0851 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0851 
Symbol 
ID3366338 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp963553 
End bp964185 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content56% 
IMG OID637651189 
Productputative sulfite oxidase subunit YedZ 
Protein accessionYP_233947 
Protein GI66044106 
COG category[S] Function unknown 
COG ID[COG2717] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value5.63409e-07 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0108432 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGATATC CGTTTTTGCG TCTGGCTGTA TTTCTTGCCG CTTGTATTGC GCCTGTGTGG 
TGGTTGTACC AGGCATGGAT TTTTGCGCTC GGACCTGATC CCGGCAAGGT CCTTGTGGAA
AACTTCGGAG TGGCGACGCT GGTCATGCTG CTGATCACGC TCTCCATGAC ACCGTTGCAG
CGCCTTACCG GTTGGTCCGG GTGGATTGTG GTGCGTCGCC AACTGGGCCT GTGGTGCTTT
GCCTATGCGT TGCTGCACCT GAGCATGTAC GCACTGTTCA TTCTGGGGCT GGATTGGGGG
CAGTTGGGTG TCGAACTGGT CAAGCGTCCT TATATCATCG TCGGTGCGCT GGCGTTGCTG
GGGTTGCTTG CGCTGGCGGT GACTTCCAAC CGTTATAGTC AGCGGCGTCT GGGAGCGCGC
TGGAAAAAGC TGCATAGGAT CATCTACGTA ATTCTGGGGC TGGGTTTGCT GCATATGTTC
TGGATTGTCC GGGCTGACCT TAAAGAGTGG GCGCTGTATG CGGGGATAGG TGCATTCCTG
TTACTGCTGC GCATTCCCGT GTTTGCTCGG CGAATCCCGC GTCTGGGCGG CGCTGCGAAG
GCCAGATCGG TAAAAGTTCA AAATAACGGT TGA
 
Protein sequence
MRYPFLRLAV FLAACIAPVW WLYQAWIFAL GPDPGKVLVE NFGVATLVML LITLSMTPLQ 
RLTGWSGWIV VRRQLGLWCF AYALLHLSMY ALFILGLDWG QLGVELVKRP YIIVGALALL
GLLALAVTSN RYSQRRLGAR WKKLHRIIYV ILGLGLLHMF WIVRADLKEW ALYAGIGAFL
LLLRIPVFAR RIPRLGGAAK ARSVKVQNNG