| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_0843 |
|---|
| Symbol | |
|---|
| ID | 3366330 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | + |
|---|
| Start bp | 956274 |
|---|
| End bp | 957017 |
|---|
| Gene Length | 744 bp |
|---|
| Protein Length | 247 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637651181 |
|---|
| Product | TPR repeat-containing protein |
|---|
| Protein accession | YP_233939 |
|---|
| Protein GI | 66044098 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 3 |
|---|
| Fosmid unclonability p-value | 0.000361866 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGAATAAAT GGTGGATTCC AGCTTTAACG GCACTGGCCT TGCTGAACGG CTGCGCCAGT
GTGGAACGCG GCTCGATTCC GGTCGTGGAT TCGAGCTCCA AGGTGTCCAA TGGCGAAGGT
GCGGCAGCGT CGCGTAACGG TTCTTACCGG ACCAACACGA CGCCTGTGCA ACAGCAGGCG
CAAGCCGTGC CGCAGGACTC GGGCGTCGTA GTGATGGTGC CGGGCGCGGG TGGCGCCGAT
GCAGGACAGA GTTACTCTGC GCCCGCCAGT CAGGCGCCGT TCAGTGTCAA CACTCCGCCT
GTCGATGCTG CGCCGGTCAC CGAGGACCCG GTCAGTCAGG CTCCTGCAAA CAACAGCTAC
AGCATGCCGG CCGCTTCTGC CCCGACCGGG ATCCCGTCCA GCGGTGGCGG TCTGTCGGAG
GACGAGCAGC TTGACGGGCC CGTACTGGCA TTGCTGACCA CCGCCCAGCA ACAGCAGACC
AGTGGCGATC TCAATGGCGC GTCGTCCAGT CTCGAGCGTG CGCAGCGGGT TGCACCGCGC
GAGCCGCAAG TGCTCTATCG TCTGGCTCAG GTGCGTCTGG CTCAGGGCGA TGCGGCCCAG
GCCGAGCAGC TGGCACGTCG TGGTCTGACT TACGCCAACG GGCGTACCAG CCTGCAGGCC
AGTCTGTGGG GATTGATCGC TCAGTCACGC GAAAAGCAGG GTGACGCGGC CGGTGCTGCC
CTGGCTCGTC AAAAGGCTCG CTGA
|
|---|
| Protein sequence | MNKWWIPALT ALALLNGCAS VERGSIPVVD SSSKVSNGEG AAASRNGSYR TNTTPVQQQA
QAVPQDSGVV VMVPGAGGAD AGQSYSAPAS QAPFSVNTPP VDAAPVTEDP VSQAPANNSY
SMPAASAPTG IPSSGGGLSE DEQLDGPVLA LLTTAQQQQT SGDLNGASSS LERAQRVAPR
EPQVLYRLAQ VRLAQGDAAQ AEQLARRGLT YANGRTSLQA SLWGLIAQSR EKQGDAAGAA
LARQKAR
|
|---|
| |