Gene Psyr_0841 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0841 
Symbol 
ID3366328 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp952266 
End bp953936 
Gene Length1671 bp 
Protein Length556 aa 
Translation table11 
GC content60% 
IMG OID637651179 
Producthypothetical protein 
Protein accessionYP_233937 
Protein GI66044096 
COG category[S] Function unknown
[R] General function prediction only 
COG ID[COG0645] Predicted kinase
[COG2187] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000255062 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value9.36176e-05 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGGGCGCGG ATTATACGCA CTTTACCGAG GATCGACAGA CGCCCGAGTC AGCGGTTTGC 
AGCCTCGCGC CAAGCGGCCA TAATGGCGGC ATCGTGTACT TACATTTTGA ACACATTCCT
GAAGGATCGA CCGTGAGCCA GTCTTTGATT GCTGCCCTGC AGAACCCTGC CCTCTTCCCC
CATCCGGTGG AGAGTTTCCA GGTCATCGAA ACGCACATTT CCTGGGTGCT GCTGACGGGT
CCGTATGCCT ACAAATTCAA AAAGCCGATG AACTTCGGCT TTCTGGATTT CACCACGCTG
GCCCTGCGCA AGCACTTCTG CGAAGAAGAG TTGCGCCTGA ATCAGCGTCT GACCGACGAT
CTCTACATCG AAGTCCTGCC AATCACTGGC ACAGAGGACA CGCCGCAACT GGGCGGCGAC
GGTGAAGCGA TCGAATACGC GCTGAAGATG AAACAGTTCT CGCAGGATGG CCTGCTGAGC
ACGCTGCAGG CCAACGGTGA ATTGACGACT GCGCACATCG ACGAACTGGC GCGCCAGATT
GCCGGTTTTC ACCTGACCTC GCCGCAGGTC GGAGCTGAAA GCGAACTGGG CTCGGCTGAC
AGCGTGATGG CCCCGGTGGT ACAGAATTTC GAGCAGATTC GCCCGCTGAT CAGCGAAAAA
TCCGACCTGG CACAGCTTGA TGCCCTGCAC GCGTGGGCAG AGTCGAGCTT TGCGCGACTC
AAGCCGTTGC TGGCCCACCG CAAGGCCGAT GGGTTCATCC GTGAGTGCCA TGGCGACATT
CATCTGGGCA ATGCGACGGT GATTGATGGC AAGGTCGTGC TGTTCGACTG CATCGAGTTC
AACGAGCCGT TCCGCAAGAC GGATGTCTAT GCCGACATCG GCTTTCTGGC AATGGACCTT
GAAGACCGTG GCCTGAAGTC GCTGTCACGG CGTTTGATCA GTCAGTACCT GGAAGTCACC
GGCGACTACG CGGGCCTGGA GCTGTTGAAT TTCTATAAGG CCTACCGCGC AATGGTCCGC
GCCAAGGTGG CACTGTTCAG CCAGCCGGCC GATGCCGACG GCTTGCAGCG CGCGGCGACG
CTTCGTCAGT ACCGCAACTA TGCCAATCTG GCCGAGAGCT ACAGCGCCAT CCCTTCACCA
TTCCTGACGA TCACCCACGG TGTCTCTGCC GTTGGCAAAA GCCACGTTGC GATGCGTCTG
GTGGAGTCGC TGGGCGCCAT CCGCCTGCGC TCGGACGTAG AGCGCAAGCG CCTGTTTGCC
GGCCAGGGTC AGGATCTGTA TGACGCGCAA GCCAGCAGCA CAACCTATGC ACGCCTGCAT
GAGCTGGCCA CCGCAACCCT GCGCGCAGGC TTCTCGGTGG TAATCGATGC CACTTACCTC
AAGCGCGAGC AGCGCGATGC GGCGGCAAAG GTTGCCGAAA ACACCGGCGT CCCGTTCCTG
ATTCTGGATT GCGAAGCACC GCAGGCGGTG ATCGCTGGCT GGCTTGCGCA GCGTCAGGCA
CAGGACAACG ACCCCTCTGA CGCGACACTG GAAGTCATCG AGGCTCAGCA GGCCAGTCGC
GAGCCGCTCG GCGCCGACGA AATCCTGCGC AGCAAGAAGG TTGCAACCAA CGTCAGCAGC
GATCTGGACA GCCTTATCGA CAACCTGCGT CAGCGCATGC CGGGTCTGTA A
 
Protein sequence
MGADYTHFTE DRQTPESAVC SLAPSGHNGG IVYLHFEHIP EGSTVSQSLI AALQNPALFP 
HPVESFQVIE THISWVLLTG PYAYKFKKPM NFGFLDFTTL ALRKHFCEEE LRLNQRLTDD
LYIEVLPITG TEDTPQLGGD GEAIEYALKM KQFSQDGLLS TLQANGELTT AHIDELARQI
AGFHLTSPQV GAESELGSAD SVMAPVVQNF EQIRPLISEK SDLAQLDALH AWAESSFARL
KPLLAHRKAD GFIRECHGDI HLGNATVIDG KVVLFDCIEF NEPFRKTDVY ADIGFLAMDL
EDRGLKSLSR RLISQYLEVT GDYAGLELLN FYKAYRAMVR AKVALFSQPA DADGLQRAAT
LRQYRNYANL AESYSAIPSP FLTITHGVSA VGKSHVAMRL VESLGAIRLR SDVERKRLFA
GQGQDLYDAQ ASSTTYARLH ELATATLRAG FSVVIDATYL KREQRDAAAK VAENTGVPFL
ILDCEAPQAV IAGWLAQRQA QDNDPSDATL EVIEAQQASR EPLGADEILR SKKVATNVSS
DLDSLIDNLR QRMPGL