Gene Psyr_0839 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0839 
Symbol 
ID3366326 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp950669 
End bp951454 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content62% 
IMG OID637651177 
Productdeoxyribose-phosphate aldolase 
Protein accessionYP_233935 
Protein GI66044094 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0274] Deoxyribose-phosphate aldolase 
TIGRFAM ID[TIGR00126] deoxyribose-phosphate aldolase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000295758 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value7.7294e-05 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGAAAGAGA TGACAGCAGA TGATGAGCGG CTGGCGCGTC AGGTCATCGG GCTGCTTGAG 
CTGTTTGCCC TCAATACAGA CGACACTGAG CAGCGCATTG TCGGCATCTG TCGGCGCGCA
TGCACGCCTG TGGGACCGGT TGCAGCGGTC AGCGTCCAGC AACGTTTCGT GTGTCTGGCA
CGCACCACGC TGGATCGCTT ACAGGCTCGT CATATCAAGG TCGTCGCCGT GGTCAATTTC
CCTCATGGCA GCAGCAATGT TCAGTCGGTC ATCGCCCAGG TACGTGCTGC GCTGATGGCT
GGCGCGGATG AAATCGACGT CGTGTATCCC TTTCGCGCGC TGCTCGGCGG AGACCGGCAG
CCCGGCCTGG CGATGATCTC GGCGTGTTCG GCCTTGTGTG CCGGGCAGGT GATGCTTACA
GCGACGCTTG AAACCGGTGA CTTGCGTGAC TCGCAAATGA TCCTCGACGC TTGCCGCGAT
GCGATTGTTT CGGGCGCTGA CTTCATCAAG ACCAGCACCG GCAAGGCCGC CAGGCATGTC
ACGCCGCAGG CTGCACGGAT CATGCTGGAG TCCATTGCCG ACGTAGGCGG GCAAGTGGGG
CTGAAGGTTG CAGGCGGAAT CCGTACGTTC GACGAGGCGC GTGTTTACAT GGCACTGGTC
CGCGCGCGAT TTGGCCTGCA ATGGATCAAC GCCGGGCGCT TTCGGCTGGG CGGCTCCAGC
GTGCTGGACG ACTTGCTGGC AAGGCTCGGC CTGCTCGAGT CGCATGGTGG TGGCGATGGC
TTTTGA
 
Protein sequence
MKEMTADDER LARQVIGLLE LFALNTDDTE QRIVGICRRA CTPVGPVAAV SVQQRFVCLA 
RTTLDRLQAR HIKVVAVVNF PHGSSNVQSV IAQVRAALMA GADEIDVVYP FRALLGGDRQ
PGLAMISACS ALCAGQVMLT ATLETGDLRD SQMILDACRD AIVSGADFIK TSTGKAARHV
TPQAARIMLE SIADVGGQVG LKVAGGIRTF DEARVYMALV RARFGLQWIN AGRFRLGGSS
VLDDLLARLG LLESHGGGDG F