Gene Psyr_0820 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0820 
Symbol 
ID3366307 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp925431 
End bp926426 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content59% 
IMG OID637651158 
ProductDNA-binding transcriptional regulator FruR 
Protein accessionYP_233916 
Protein GI66044075 
COG category[K] Transcription 
COG ID[COG1609] Transcriptional regulators 
TIGRFAM ID[TIGR02417] D-fructose-responsive transcription factor 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.193508 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAACTGA GCGATATCGC ACGTCTGGCA GGTGTTTCTG TCACTACGGC CAGTTACGTC 
ATCAATGGCA AGGCCGAAAA ACAGCGTATC AGCCCGGCAA CGGTCGAGCG TGTCAAAGCC
GTGGTCGAGC AGCACGACTT TCGGCCCAAC CCGCAAGCGG CGGGCCTGCG CAGCCGTCAT
AGCAAGACAC TGGGCTTTAT CCTGCCCGAC CTGGAAAACC CCAGCTATGC GCGTATCGCC
AAATTGCTCG AGCAAGGCGC GCGTAGACTC GGTTATCAAC TCCTTATCGC CAGTTCTGAT
GACGACCCCG CCAGCGAGCT GCAGCTTCTG CAGCTGTTCC GAGCACGCCG TTGTGATGCA
CTGCTGGTCG CCAGTTGCCT GCCGACCGGT GACGACAGCT ACCGCGAATT GCAGCTCAAG
GGCACGCCGA TCATCGCCAT CGACCGGGAA ATGAATCCCG AGTTTTTCTG CTCGGTGGTC
AGCGACGACC ACGACGCCTG TCAGCAACTG ACCCACAGCC TCCTGCAAAC CCGACCGCGA
CACATCGCCC TGATCAGCGC ACGTCCTGAA CTGAGCATCA GTCGCGCGCG TGCCGCCGGC
TTCGAACACG CACTCGACGG GTTTACCGGA GCCACCATCA TTGAGCATGG CGAAGCGTTC
AGCCGCCAGT GTGGTCAGCG TTTGATGACC GAAATGTTAC AGCGCCAGGG ACATCTTCCG
GACGCGTTGA TCACCACGTC CTACGTGCTG CTGCAAGGCG TGTTCGATGT ACTGCAAAGC
CAGGCACTGC AATCAACCCA ATTGCATCTG GGCACTTTCG GCGATACTCA ATTGCTGGAT
TTCCTGCCGC TGCCCGTCAA CGCCATGGCC CAGCAACACC AATTGATCGC CGACAAAGCC
CTGCAACTGG CGCTGGCGGC TATCGAGAAG GATGACTACC AGCCAGGCGT GCATGCGATT
GCCAGGGCCT TCAAGCAACG TATTCACGAG GCGTGA
 
Protein sequence
MKLSDIARLA GVSVTTASYV INGKAEKQRI SPATVERVKA VVEQHDFRPN PQAAGLRSRH 
SKTLGFILPD LENPSYARIA KLLEQGARRL GYQLLIASSD DDPASELQLL QLFRARRCDA
LLVASCLPTG DDSYRELQLK GTPIIAIDRE MNPEFFCSVV SDDHDACQQL THSLLQTRPR
HIALISARPE LSISRARAAG FEHALDGFTG ATIIEHGEAF SRQCGQRLMT EMLQRQGHLP
DALITTSYVL LQGVFDVLQS QALQSTQLHL GTFGDTQLLD FLPLPVNAMA QQHQLIADKA
LQLALAAIEK DDYQPGVHAI ARAFKQRIHE A