| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_0784 |
|---|
| Symbol | |
|---|
| ID | 3366271 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | - |
|---|
| Start bp | 890312 |
|---|
| End bp | 890851 |
|---|
| Gene Length | 540 bp |
|---|
| Protein Length | 179 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637651122 |
|---|
| Product | CheW-like protein |
|---|
| Protein accession | YP_233880 |
|---|
| Protein GI | 66044039 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0835] Chemotaxis signal transduction protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.883745 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGCTCAT TGGTCACGAC TCGGCAGACC GCAGCGACGG TCGAAGAAGA GGCGCAGTAC
CTGACTTTCA TGCTCGGTGG CGAGATGTTC GCCATCGGCA TTCTGGGCAT CAAGGAAATC
ATCGAGTACG GCAGCCTGAC GGTGGTGCCG ATGATGCCCG CCTTCGTGCG CGGGGTGATC
AATCTGCGCG GCGCTGTGGT GCCTGTGGTT GATCTGTCGG CGCGCTTCGG GCGACAGAAC
TCGGCCATCA CCCGGCGCTC GTGCGTGATC ATCATCGAGG CCAACAGTGA GGACGGCCAG
CCGCAGGACA TCGGCCTGCT GGTCGACAAT GTCTCGGCGG TGCTGGAGAT TCCGGCGTCG
CAGATCGAGC CGCCGCCGAA CTTCGGTGCG CGAATTCGCG CCGACTTCAT CAGCGGCATG
GCCAAGGTCG ACGGCAAGTT CGTGATCGTT CTTGAGGTCG ACCGCGTGTT GTCCATCGAT
GAAATGTCCA GCCTAGCCGA AGCAGGCCAG TCGCTGCCGC CCGACGTCGA CGCGACGTGA
|
|---|
| Protein sequence | MGSLVTTRQT AATVEEEAQY LTFMLGGEMF AIGILGIKEI IEYGSLTVVP MMPAFVRGVI
NLRGAVVPVV DLSARFGRQN SAITRRSCVI IIEANSEDGQ PQDIGLLVDN VSAVLEIPAS
QIEPPPNFGA RIRADFISGM AKVDGKFVIV LEVDRVLSID EMSSLAEAGQ SLPPDVDAT
|
|---|
| |