Gene Psyr_0761 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0761 
Symbol 
ID3366248 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp866593 
End bp867555 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content61% 
IMG OID637651100 
Productbinding-protein dependent transport system inner membrane protein 
Protein accessionYP_233857 
Protein GI66044016 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1175] ABC-type sugar transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0629996 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.824676 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGTCT CTTCTACCGA CTACCCCGGA GACGACGAAC TCGTCACCCG GGAAACGCCT 
GTACAACGTC GCAGGCTACG CGCCGCCTGG CTGTTTCTGA CGCCGATGCT GGTGTGCCTG
GTGCTGGTGG CGGCCTGGCC ATTGCTGCGC ACATTCTGGT TCAGCCTGAC CGACGCCGAT
CTGTCGGATA CCGGCAGTGG CTCATTCGTG GGCCTGAGCA ATTATCTGCT CTACGACGGC
GTCATCTGGT CTGGCGTTCT GGTCGATCCG CAATGGTGGA ACGCGGTGCG CAACACCCTG
TATTTCACCG TGGTGTCGGT CGGGCTGGAA ATGGTCCTCG GACTGATGGT GGCGTTGCTG
TTGAACGTCA AGTTCACCGG CCGCGCGCTG GTGCGTGCGT TGATTCTGAT CCCTTGGGCG
ATTCCGACCA TCGTCTCGGC GAAAATCTGG TCGTGGATGC TCAACGACCA GTTCGGCATC
ATCAACCACA TGATGCTGAG CCTGGGCCTG ATTGACGCGC CACTGGCCTG GACGGCAGAT
GCGGATCTGT CGATGTGGGC AGTGATCATT GTCGACGTCT GGAAGACCGT GCCCTTTGTC
ACCCTGCTGA TGCTCGCGGC ACTGCAGATG CTGCCAAGCG ATTGCTACGA AGCCGCCAGG
GTCGATGGCA TTCATCCGGT GCGGGTGTTC TGGCGTGTGA CGTTGCCGTT GCTGATGCCC
GCCTTGTTGG TCGCCGCGAT CTTTCGCATC CTCGACTCGT TGCGGGTCTT CGACGTCATC
TACGTCCTGA CCTCCAACTC TTCGAGCACC ATGAGCATGT CGGTCTATGC CCGCCAGCAC
CTGGTGGAGT TCCAGGACGT CGGCTACGGC AGCGCCGCCT CTACCCTGCT GTTTCTGGTC
GTGGCCGTGA TTGCCATGCT TTATCTGTAC CTCGGACGCC GCCAGCTGGA GGTGCGCTCA
TGA
 
Protein sequence
MPVSSTDYPG DDELVTRETP VQRRRLRAAW LFLTPMLVCL VLVAAWPLLR TFWFSLTDAD 
LSDTGSGSFV GLSNYLLYDG VIWSGVLVDP QWWNAVRNTL YFTVVSVGLE MVLGLMVALL
LNVKFTGRAL VRALILIPWA IPTIVSAKIW SWMLNDQFGI INHMMLSLGL IDAPLAWTAD
ADLSMWAVII VDVWKTVPFV TLLMLAALQM LPSDCYEAAR VDGIHPVRVF WRVTLPLLMP
ALLVAAIFRI LDSLRVFDVI YVLTSNSSST MSMSVYARQH LVEFQDVGYG SAASTLLFLV
VAVIAMLYLY LGRRQLEVRS