Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_0700 |
Symbol | |
ID | 3366183 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 803577 |
End bp | 804545 |
Gene Length | 969 bp |
Protein Length | 322 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637651045 |
Product | trans-hexaprenyltranstransferase |
Protein accession | YP_233806 |
Protein GI | 66043965 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.286073 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAACCCC AAGCCTTCTA CCGCGCGGTG GCGGACGACT TTAGTGCCGT TGACCTTATC ATCAAAAAGC AACTGACGTC GCGCGTACCG CTGGTCTCGA AAATCGGCGA TTACATCACG TCGGCAGGTG GCAAGCGCCT GCGCCCGTTG CTGGTGCTGC TGTGTGGCAA GGCACTGGGT CGCGAAGGCG ATGATGTTCG CCTGCTCGCA GCCACCATTG AATTCCTGCA CACCGCGACC CTGCTGCATG ACGACGTGGT CGACATGTCC GGCATGCGTC GTGGTCGCTC CACCGCCAAC GCGCTCTGGG GCAATGCGCC CAGCGTATTG GTGGGCGACT TCCTTTATTC GCGCTCGTTC GAAATGATGG TCGAGCTGGG CTCGATGGAA GTCATGAAGA TTCTGTCCAA GGCAACCCGC ATCATCGCCG AAGGCGAAGT GTTGCAGCTC TCGAAGATTC GTGACGCCAG CACCACCGAA GAAACCTACA TGGAAGTGAT TCGTGGCAAG ACAGCCATGC TGTTCGAAGC CTCGACCCAC AGCGCCGCTG CCCTGTGCAA CGCCCCCCAG GAACAGAGCG AAGCACTGCG CACGTTCGGC GACCACCTGG GTGTGGCCTT CCAGCTGGTG GATGACCTGC TCGACTACCG TGGCGATGCC GAGACACTGG GCAAGAACGT CGGTGACGAC CTCGCCGAAG GCAAGCCGAC CCTGCCGCTG ATCTACACCA TGCGCGAAGG CAGCCCGGAA CAGGCCGCAC TGGTTCGCCA GGCGATCCAG AAAGGTGGTC TGGAAGATCT GGAAAGCATC CGCAATGCAG TGGAAAGCGC CGGTGCCCTC GATTACACCG CACAGCTGGC CCGCGACTAC GCGGCCCGCG CCATTGCCTG CCTGGACGCG CTGCCGCCCA GCGAGTACCG CGACGCACTG GTCGAACTGA GCGAGTTTGC GGTCGCCCGC ACGCACTGA
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Protein sequence | MQPQAFYRAV ADDFSAVDLI IKKQLTSRVP LVSKIGDYIT SAGGKRLRPL LVLLCGKALG REGDDVRLLA ATIEFLHTAT LLHDDVVDMS GMRRGRSTAN ALWGNAPSVL VGDFLYSRSF EMMVELGSME VMKILSKATR IIAEGEVLQL SKIRDASTTE ETYMEVIRGK TAMLFEASTH SAAALCNAPQ EQSEALRTFG DHLGVAFQLV DDLLDYRGDA ETLGKNVGDD LAEGKPTLPL IYTMREGSPE QAALVRQAIQ KGGLEDLESI RNAVESAGAL DYTAQLARDY AARAIACLDA LPPSEYRDAL VELSEFAVAR TH
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