Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_0697 |
Symbol | |
ID | 3366180 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 801532 |
End bp | 802632 |
Gene Length | 1101 bp |
Protein Length | 366 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637651044 |
Product | tRNA 2-selenouridine synthase |
Protein accession | YP_233805 |
Protein GI | 66043964 |
COG category | [R] General function prediction only |
COG ID | [COG2603] Predicted ATPase |
TIGRFAM ID | [TIGR03167] tRNA 2-selenouridine synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.710906 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGACA ACAGCAGCGA CTACCGCGCA CTGTTTCTCA ACGACGTGCC GATGATGGAC GCTCGGGCTC CGGTGGAGTT TTCCAAGGGG GCTTTCCCAG GCGTGATCAA CCTGCCGCTG ATGAATGACA TTGAGCGGCA AAAGGTCGGC ACCTGCTACA AGCAACACGG TCAGGACGCC GCTATCCAGC TCGGGCATCA ATTGGTCTGC GGTCAGGTCA AGGATGAACG CGTCAATGCG TGGATCGAGT TCGCCAAAGC CAATCCGGAT GGCTACCTGT ACTGCTTTCG CGGCGGGCTG CGCTCGCAGA CCGTGCAGCG CTGGCTGAAG GATGCCGGGG TCGACTACCC GCGGGTTCTT GGCGGCTACA AGGCGATGCG CACGTTCCTG CTGGATACCC TGCACGAGGC GGTGAGCGAA TGCAGTATCG TCGTGCTCGG CGGGATGACC GGCACGGGCA AGACCGAAGT ATTGACGCAA CTGCGCAACA GCGTGGACCT GGAAGGCATC GCCAATCACC GCGGCTCCAG CTTCGGCAAG CGTGCCACCG GGCAGCCGGC GCAGATCGAC TTCGAGAACC GCCTGGCCAT CGACCTGCTC AAGAAGCGCG CAGCCGGTAT CGAGCAATTC GTTGTGGAAG ATGAAAGCCG TCTGGTTGGC AGTTGCAACG TGCCGCTGGA ACTGCACCAG GCGATGCAGG GCTGCCCGAT GGTCTGGCTG GAAGACAGCT TCGAGAACCG CGTCGAGCGC ATTCTCGAGG ACTACGTGAT CAACCTCTGC GCAGAGTTCA TCACCGTCAA GGGCGAAGAG CAGGGCTTTG GCCTGTTCGC CGAGCGTTTG TTGCAAAGCC TGAACAATAT TCACAAACGT CTGGGCGGCG AGCGTCATCA GCGCCTGTCG GACCTGATGC AGGCGGCGCT GGAAGAACAG CAGCGTAGCG GTGCGGTTGA CCTGCACCGA GGCTGGATCG AAGGGTTGCT CGGCGAATAT TACGACCCGA TGTACGCTTA CCAGCGCGAA CACAAAGCGG CGCGTATCGA ATTCGCAGGT GATCAAACGC AAGTGCTGGC CTATCTGCGC GAGCGCTCTG AGCAACGTTA A
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Protein sequence | MADNSSDYRA LFLNDVPMMD ARAPVEFSKG AFPGVINLPL MNDIERQKVG TCYKQHGQDA AIQLGHQLVC GQVKDERVNA WIEFAKANPD GYLYCFRGGL RSQTVQRWLK DAGVDYPRVL GGYKAMRTFL LDTLHEAVSE CSIVVLGGMT GTGKTEVLTQ LRNSVDLEGI ANHRGSSFGK RATGQPAQID FENRLAIDLL KKRAAGIEQF VVEDESRLVG SCNVPLELHQ AMQGCPMVWL EDSFENRVER ILEDYVINLC AEFITVKGEE QGFGLFAERL LQSLNNIHKR LGGERHQRLS DLMQAALEEQ QRSGAVDLHR GWIEGLLGEY YDPMYAYQRE HKAARIEFAG DQTQVLAYLR ERSEQR
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