| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_0668 |
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| Symbol | |
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| ID | 3366146 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 756744 |
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| End bp | 757847 |
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| Gene Length | 1104 bp |
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| Protein Length | 367 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637651010 |
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| Product | Sodium/calcium exchanger membrane region |
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| Protein accession | YP_233776 |
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| Protein GI | 66043935 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0387] Ca2+/H+ antiporter |
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| TIGRFAM ID | [TIGR00378] calcium/proton exchanger (cax) |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.479816 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCGCAT TGCTCAAGCA AGAAAAGTTT CTGTTGCTGG CAATCATTGC CATGTTCGTC
GCTTATCCAC TGGAGCATGT GCTGGTAGGC AATGGTCAGG TCGTTGCGCT GGTGTCGGGG
CTGGCGCTGG TCGCTTTCAT CATCTGCGCC TCGATGCGCG TTGCGCATCA CGCCGAGATG
CTCGCGGAAA AGGTCGGCGA TCCTTACGGC ACGATGATCC TCACGCTCTC GGCGGTAACG
GTCGAAGTGG TGATCCTGGC GATCATGATG AGCAACGAGC CGTCGCCGAC GCTGGTACGC
GACACGATTT ATTCGGCGGT GATGCTCGAC ATCAACGGCA TCCTCGGCCT TGCGGCGCTG
ATGGGCGGTA TCAAGCACGG CGAGCAGTCG TACAACGACG ATTCGGCGCG CACCTACAGC
GTGATGATCC TCACCGCGAT GGGTGTGTCG ATGGTCGTAC CCGAGTTCAT TCCCAAGGGT
GACTGGAAGA TCTATTCGGC GTTTACCATT GGCGCGATGA TCCTCCTCTA CACCCTGTTC
CTGCGCATGC AGGTCGGGCC GCACAGTTAC TTTTTCAGCT ACAGCTACCC GGAAAAGAAG
AAGCGTCAGA GCCAGGGCTC CAATCCGGCT GAAGAGCATG CGGAACCGGT CAATCTGACC
CGCTCAATTG CCACACTGGT TGTCGGCGTG GTGGTGATCG GTGCGCTGGC CGAAGTGATG
TCGAAGACGG TTGACCTGGG CCTGGAAGGC ACCGGTGCAC CGCCGGTGAT GACCGCCATC
CTGGTAGCCG CCATCTCTGC CGCGCCCGAG ATCCTCACGG CCCTGCGTGC CGCGTTGGCC
AACCGCATGC AGTCGGTGGT CAACATCGCT CTGGGTGCGT CGCTGTCGAC CGTGATCCTG
ACCGTTCCGG TGATGGAAGC CATGGCACTT TACAGCGGCC AGCCCTTCCA GATGGCCATG
ACTCCGGTGC AGACCGTGAT GATCCTCATC ACCCTGCTGG TGTCCGCCAT CAACCTCAAC
GACGGCGAAA CCAACGCCAT CGAAGGCATG ACCCACTTCG TGCTGTTCGC GACGTTCATC
ATGCTGTCGT GTCTGGGGCT TTAG
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| Protein sequence | MGALLKQEKF LLLAIIAMFV AYPLEHVLVG NGQVVALVSG LALVAFIICA SMRVAHHAEM
LAEKVGDPYG TMILTLSAVT VEVVILAIMM SNEPSPTLVR DTIYSAVMLD INGILGLAAL
MGGIKHGEQS YNDDSARTYS VMILTAMGVS MVVPEFIPKG DWKIYSAFTI GAMILLYTLF
LRMQVGPHSY FFSYSYPEKK KRQSQGSNPA EEHAEPVNLT RSIATLVVGV VVIGALAEVM
SKTVDLGLEG TGAPPVMTAI LVAAISAAPE ILTALRAALA NRMQSVVNIA LGASLSTVIL
TVPVMEAMAL YSGQPFQMAM TPVQTVMILI TLLVSAINLN DGETNAIEGM THFVLFATFI
MLSCLGL
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