Gene Psyr_0657 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0657 
Symbol 
ID3366135 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp744766 
End bp745962 
Gene Length1197 bp 
Protein Length398 aa 
Translation table11 
GC content64% 
IMG OID637650999 
ProductBcr/CflA subfamily drug resistance transporter 
Protein accessionYP_233765 
Protein GI66043924 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00710] drug resistance transporter, Bcr/CflA subfamily
[TIGR00880] Multidrug resistance protein 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.327939 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCTAC GAACGATCCT TATCCTTGGC TCATTGAGCG CCTTCGGCCC TCTGGCCATC 
GACTTCTATC TTCCTGGCTT TCCGGCCATG GCCTCGTATT TCGGGACCGA TGAAAAACAC
GTACAACTGA CCCTGGCGGC CTACTTTCTG GGACTCTCCC TGGGGCAACT GGCCTATGGC
CCGGTGGCTG ACCGGTTCGG TCGGCGCATT CCGCTTCTGG TCGGCGTAAC CCTGTTCATG
CTTGCCTCGG TCGCCTGCGC CTTTGCGCCG AGTCTTGAAT GGCTGATTGC CGCGCGCTTC
GTGCAGGCGT TGGGCGGCTG TGCCGGGATG GTCTTGTCAC GCGCCATCGT CAGCGACAAG
TGCAATGCCG TCGAGTCGGC CAAGGTTTTC TCGCAACTGA TGCTGGTCAT GGGCCTGGCA
CCGATTCTGG CCCCGATGCT GGGTGGTGTG CTGGTCAGTA CCTTTGGCTG GCAATCGATC
TTCGTCAGCC TCGCCCTGTT CAGCGGTGCC TGCCTGGCGG CGGTTGCGCT GGGGTTGCCG
GAAAGCATGC CGGCCACCAC ACCGCGTCAG CCATTGAGCG GCGCGCTGGG CCAGTACCTC
AATCTGTTCA AGGACGGTGT GTTCATCGGT CACGCGCTGA CCGGCGGCAT CGCCATGGCC
GGGATGTTCG CCTACGTCGC AGGCTCGCCG TTTGTGTTCA TCAAACTGTA TGGCGTGCCT
GCCGAGCACT ACGGCTGGCT GTTCGGGATG AATGCGGCGG GCTTCATTCT GGTGGCGCAG
ATCAACGCGC GTATCTTGCG CAAGACCGGC CCGGCGTTTT TGCTGTCGCG CACGGTCTGG
ATTTATCTGG CTGCCGGGCT GGTGTTGCTG GCGATCAGCG GGCTGCGCAC CGAGGCGCTT
TGGCCACTGC TGGTGCCGCT GTTCATCTGC GTGGCAAGCC TGGGCTGCAT CATCCCCAAT
GCGTCGGCCT GCGCCATGAA TGGCCAATGG GCGCGCGCGG GCAGTGCCTC GGCGTTGCTG
GGTTGTCTGC AATTCAGCGT TGCCGCCGTC GCTGCCAGTC TGGTGGGCGT GCTGCATGAC
GGCACGGCCA CACCGATGGC GCTGGTCATC AGCCTGTGCG GCGTGCTGAC CGTGGGCCTC
TCGGTGCTGA CGCGACGTGC GCAGGCCCGG CGCGACGCAT CGCTCCAGAC CGCCTGA
 
Protein sequence
MNLRTILILG SLSAFGPLAI DFYLPGFPAM ASYFGTDEKH VQLTLAAYFL GLSLGQLAYG 
PVADRFGRRI PLLVGVTLFM LASVACAFAP SLEWLIAARF VQALGGCAGM VLSRAIVSDK
CNAVESAKVF SQLMLVMGLA PILAPMLGGV LVSTFGWQSI FVSLALFSGA CLAAVALGLP
ESMPATTPRQ PLSGALGQYL NLFKDGVFIG HALTGGIAMA GMFAYVAGSP FVFIKLYGVP
AEHYGWLFGM NAAGFILVAQ INARILRKTG PAFLLSRTVW IYLAAGLVLL AISGLRTEAL
WPLLVPLFIC VASLGCIIPN ASACAMNGQW ARAGSASALL GCLQFSVAAV AASLVGVLHD
GTATPMALVI SLCGVLTVGL SVLTRRAQAR RDASLQTA