| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_0625 |
|---|
| Symbol | |
|---|
| ID | 3366103 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | - |
|---|
| Start bp | 714416 |
|---|
| End bp | 715225 |
|---|
| Gene Length | 810 bp |
|---|
| Protein Length | 269 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637650967 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_233733 |
|---|
| Protein GI | 66043892 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3228] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.461583 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTGGTCAT TCAGCCACTG GCGCAGGCAG CGCACGCTGG CCCGACACCC GGTTGCTGAA
GAGCTATGGC AGAACGTCTG CGCACGTCTG CCTATCCTCG ATGGCCTGGG CAACGGGCAG
CACGCGCAAC TGCGTGACGC CTGCGTGCTG TTTCTGCATG ACAAACACCT CAGCGCGCTG
CCGGGCGTTG ATCTGGATGA CGAACAGCGG CTGTTTCTCG CCGCCCAGGC GCAGTTGCCG
CTGCTGAACC TCGGCGAACT GAACTGGTAT CAGGGCTTTC ATGAAATCGT GTTGTACCCC
GACGACTTCG TCAGCCCGCA GCGCCATCGC GATGCCAGCG GCGTCGAACA CGAGTGGGAT
GGCGAGCACA GCGGCGAAGC CTGGCTGCAG GGCCCGGTGA TTCTGGCCTG GCCCGGCGTA
TTGAGCAGCG GCGGCTGGGA TGGCTACAAC CTAGTGATCC ATGAACTGGC GCACAAGCTC
GACATGCTCA ACGGCGACGC CAATGGCCTG CCGCCGCTGC ACAGCGACAT GCAGGTGACC
GAGTGGGCCC GCGTCATGCA AAGCGCGTTC GATGATCTCA ACCGGCAACT GGACCACAAC
CCCGACGCAG AACCCGCCAT CGACCCCTAT GCCGCCGAAG ACCCCGCCGA GTTCTTCGCC
GTGACCAGCG AATACTTCTT CAGCGCGCCC GACCTGCTGC ACGGCAGTTA CCCGGCCGTC
TACGAACAAC TGAAAGCGTT CTACCGTCAG GACACCCTGG CGCGGCTCGA CCTGCTGCGT
CAACAGGACC CGGCATACCG GGACAGCTGA
|
|---|
| Protein sequence | MWSFSHWRRQ RTLARHPVAE ELWQNVCARL PILDGLGNGQ HAQLRDACVL FLHDKHLSAL
PGVDLDDEQR LFLAAQAQLP LLNLGELNWY QGFHEIVLYP DDFVSPQRHR DASGVEHEWD
GEHSGEAWLQ GPVILAWPGV LSSGGWDGYN LVIHELAHKL DMLNGDANGL PPLHSDMQVT
EWARVMQSAF DDLNRQLDHN PDAEPAIDPY AAEDPAEFFA VTSEYFFSAP DLLHGSYPAV
YEQLKAFYRQ DTLARLDLLR QQDPAYRDS
|
|---|
| |