| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_0620 |
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| Symbol | |
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| ID | 3366098 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 708816 |
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| End bp | 711095 |
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| Gene Length | 2280 bp |
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| Protein Length | 759 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637650962 |
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| Product | Outer membrane autotransporter barrel |
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| Protein accession | YP_233728 |
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| Protein GI | 66043887 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4625] Uncharacterized protein with a C-terminal OMP (outer membrane protein) domain |
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| TIGRFAM ID | [TIGR01414] outer membrane autotransporter barrel domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.553237 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTCGCA AGACCCTTCT CGCAATGGCT ATGGCTGCAA CTGCTGTTCC GGCTTGTGCT
GAAACAGTCG AATTGACCAA CGCTGGCTTC AAGAGCGAGC GTCAGACCCA TACCGGCAAT
CTCGAAATCA ACGGTGCCTA TTCGGGCAGT GCAGTTAAAG ATGCGATCCA GCTAAGTGGT
TCGACTATTG AAAAGGGTCT GATCCTCAAC GCGAACATCA GCGGTTCCGG CAACTTTGCC
AGTGGGGAAG CAGCCAAAGG TATCAGCCTT GAGGGGGGCA AGATTAACGG CAGCGTCATT
AACCGCAGCC TGGTTGACGT TACTGGCCAA GGCGCGACGG CCCTGGATGT CGCCACGAGT
CTGAAAGCTT TCGAAAACCA TGGCAGCCTC TCCGCTAGCG GCACGGGGTC TCAAGGTCTT
CGAATCGACG GGGTCACCTT GATAGGCAAT AGTGCGGATC TGATCAATAC GGGGACGATC
CGCGGCGAGG GCGCTGCTAT CGTGATGGGC ACTACCAGGT TCGCTATGAT CGGCGCTCAA
CCCTGGTACA TAGAACGGGG CGACTTCAAT ATCTACAACG ACGGTTCGAT CATTTCCGCT
GACAGGGCCA TCGACGCCTC TAAAAGCAAT CGTCCGGTCG AGCTGATCCT GAGAAAAGGC
AGCGTCGTTG TCGGTAACCT GATCGACCTG AGCAATATCG AACTGGAAGG GGATACTTCC
TTCACAGGTA CTGACAGCCG TACGGATGGC TACAACATTC GCCTCAAGAG CGGCGGATCG
GTTTACGTTG GCGGCAGCTC CGACAGTCCT ACTACCATGA CGTTCGAGTC CGCACACAGC
AGCATTAATG GCGATCTGTA TGTCGACGGC AACTCGGCGC TCGGCCTGAA TCTGAGCAAG
GCCACTGATA CTAAAACCGC GGTGCTGAAA GTTACCGGCA TCACTCAGTT CGAACCGGGA
GCGCAAGTAA AGCTCGCGGC CAAGGGTGAC GACTTCAGCG CCAACAGCAC TGCTTACAAG
CTTATCGAAG CAGGCAAGAT CGAACTGCTG ACCAAGGATG GAAACGCGGT CGATCCTGCC
GGCAAACTCG ATGTGGTCAG TACCTCGGCG CTGCTTAAAA TCGACAGCTA TACCGTTGAC
GGCAAAAACG TGGTGGCTGT GGTCACCGCC AAGGGCAGGG AAGAGGTCGC TCAGGTAGTT
GCCGACAACG GCGGTTCAGT TAATGAACAG ACGACACTGG TCAACCTGAC TGGCGATAGC
ATCATCAGCA AGCTGAACGA CAGCGATGCG TTCAAACAGC TTTTGTTGAA TGCTGACGGG
GGGCAGCTCG CCAAGCTGGC CTCTCAGCTG TCGCCGGAGA TCAACGGCGG GGCCAGAAGC
GCCGCTACTA CCAGCCAAGG CCTGATCAGC AATGTAACTG GCAGCCGCAC CAGCTCGATA
CGCGGTGCTT CCTCTGGTGA GGGCTTCAAA GATGCAGGTG TCTGGGTCCA GTCGCTTTAC
AGCGACGCCA CTCAAGGCCA GCGTGACGGG ATTGCTGGCT ATAACGCTTA CAGCAGCGGA
GTCGCTGTGG GCGCTGACGG CAAACTCAAT GACAACCTGA CGCTGGGCCT GGCCTACAGC
TTCATCAATA CCGACGTGAA TGGCAAAAGT GGCAACAAAA CCGAAGTCGA CAGCCATGCA
TTCACGTTGT ATGGCGGCTT CGAGCAGGGC AATTACTTTG TCGATACAAG CCTGACTTAC
GGCTTCAATG ACAATCAGGG CAAACGCAGC ATCGCCGGTA CACGTGCCAA GGCTGATTAT
GACAGTGACC TGCTGGGGCT GAATCTGGTG GGTGGTTACA CCTATCACGT CAGCCCGCAA
GTCCTGGTCG AGCCGCGCGT GGCGGCGCGT TACAGCCAGG TGAATATCGA CGGCTATCGC
GAGAAGGGTT CGTCGGCTGC GCTGAAGGTC GAAGATCAGC GTTATGAAAC CGTTGAGCTG
GGCGCAGGCA TGCGCGTGGC TGGCAGCTTC CTCTTGGGCG CCGGAACGCT GGAGCCACAG
GCCAAGCTGA TGGCCTACCA TGACTTTGCC GCCGACGAAG CGCAGAGCAC GTCCACCTTT
TTGCTCGGCA GTACACCGTT TGTAACCAGC GGTGCCAAGG CTGTGCGTGA CAGTTACGAA
GCGGGTGTGG GTGCCGACTA CAAACTGGGT GCAGTTACAC TGGGCGTCAA CTACGACTAC
ATCGGGAAAT CGGACTTCGA TGCCGATGTG TTCTCCGCAA AAGTGCGTTA CGACTTTTGA
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| Protein sequence | MFRKTLLAMA MAATAVPACA ETVELTNAGF KSERQTHTGN LEINGAYSGS AVKDAIQLSG
STIEKGLILN ANISGSGNFA SGEAAKGISL EGGKINGSVI NRSLVDVTGQ GATALDVATS
LKAFENHGSL SASGTGSQGL RIDGVTLIGN SADLINTGTI RGEGAAIVMG TTRFAMIGAQ
PWYIERGDFN IYNDGSIISA DRAIDASKSN RPVELILRKG SVVVGNLIDL SNIELEGDTS
FTGTDSRTDG YNIRLKSGGS VYVGGSSDSP TTMTFESAHS SINGDLYVDG NSALGLNLSK
ATDTKTAVLK VTGITQFEPG AQVKLAAKGD DFSANSTAYK LIEAGKIELL TKDGNAVDPA
GKLDVVSTSA LLKIDSYTVD GKNVVAVVTA KGREEVAQVV ADNGGSVNEQ TTLVNLTGDS
IISKLNDSDA FKQLLLNADG GQLAKLASQL SPEINGGARS AATTSQGLIS NVTGSRTSSI
RGASSGEGFK DAGVWVQSLY SDATQGQRDG IAGYNAYSSG VAVGADGKLN DNLTLGLAYS
FINTDVNGKS GNKTEVDSHA FTLYGGFEQG NYFVDTSLTY GFNDNQGKRS IAGTRAKADY
DSDLLGLNLV GGYTYHVSPQ VLVEPRVAAR YSQVNIDGYR EKGSSAALKV EDQRYETVEL
GAGMRVAGSF LLGAGTLEPQ AKLMAYHDFA ADEAQSTSTF LLGSTPFVTS GAKAVRDSYE
AGVGADYKLG AVTLGVNYDY IGKSDFDADV FSAKVRYDF
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