Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_0605 |
Symbol | |
ID | 3366083 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 695679 |
End bp | 696566 |
Gene Length | 888 bp |
Protein Length | 295 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637650947 |
Product | polyprenyl synthetase |
Protein accession | YP_233713 |
Protein GI | 66043872 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.158094 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.173751 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCGCGA GCTATCAAGC GCAAAGCCAG ACTCGCGTCA ACGCAGCACT CGACGGGCTG TTCAAGGCTC CGGGCCCTGA GCTCGAACGC CTCTACCAAG CCATGCGCTA CAGCGTGATG AACGGCGGCA AGCGCGTGCG CCCGCTGCTC GCGTATGCCG CCTGCGAAGC ACTGGGCGGT GTAGCCGAGG ATGCCAACGG CGCCGCCTGT GCCGTTGAAC TGATTCATGC CTATTCGCTG GTACATGACG ATTTGCCGGC AATGGACGAC GACGACCTGC GTCGCGGTCA GCCGACCACG CACAAGGCCT TCGATGAAGC CTGCGCGATC CTCGCCGGTG ACGGCCTGCA AAGCCTGGCT TTCACGGCCC TGCTCGCCCC TCACCTGACG TCACGCGATG CCGAGACGCG TCTGCAGATG GTCACGGCCC TCGCGACTGC GGCCGGACCG GCGGGCATGG TGGGTGGTCA GGCTATCGAT CTGGGTTCAG TGGGGCTGAA GCTCGATCAG GCCGCGCTGG AATACATGCA TCGCCACAAG ACCGGCGCAT TGATCGAAGC CAGCGTTCGG CTTGGCGCAC TGGCCAGCGG TCACGCCGAT CAGCCGCGCC TCGATGCTCT GCAGGTCTAC GCGCGGGCAA TCGGCCTGGC GTTTCAGGTT CAGGACGACA TTCTCGATGT CGAAAGCGAT ACCGCGACGC TCGGCAAGCG CCAGGGCGCC GACATCGCTC GCGACAAGCC GACCTACCCG GCGCTGCTGG GCCTGGAAGC GGCCAAGCAC TATGCACTGG AACTGCGTGA TCAGGCGCTG CAAGCGCTGA GCCCGTTCGA TGCCGCCGCA GAGCCGTTGC GCCAGCTGGC ACGCTACATC GTCGAACGTC GCCACTGA
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Protein sequence | MIASYQAQSQ TRVNAALDGL FKAPGPELER LYQAMRYSVM NGGKRVRPLL AYAACEALGG VAEDANGAAC AVELIHAYSL VHDDLPAMDD DDLRRGQPTT HKAFDEACAI LAGDGLQSLA FTALLAPHLT SRDAETRLQM VTALATAAGP AGMVGGQAID LGSVGLKLDQ AALEYMHRHK TGALIEASVR LGALASGHAD QPRLDALQVY ARAIGLAFQV QDDILDVESD TATLGKRQGA DIARDKPTYP ALLGLEAAKH YALELRDQAL QALSPFDAAA EPLRQLARYI VERRH
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