Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_0597 |
Symbol | |
ID | 3366075 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 685704 |
End bp | 686840 |
Gene Length | 1137 bp |
Protein Length | 378 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637650939 |
Product | extracellular ligand-binding receptor |
Protein accession | YP_233705 |
Protein GI | 66043864 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.577839 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGCATA CGTTTTACAG GAAAGGTTTT CTGGCAATCG CAGTGGCTAC TGCATTGGGC GTGTCTTCGT TTGCACAGGC GGACGTGAAA ATCGGCGTAG CGGGCCCGAT GACCGGCGCG AACGCGTCGT TTGGTCAGCA GTACATGAAG GGCGCGCAGG CAGCAGCCGA TGCGATCAAT GCGGCAGGTG GTGTCAACGG GGAGAAAATC GTACTGATCG CAGGCGATGA CGCTTGTGAG CCCAAGCAGG CCGTGGCAGT TGCCAACCGC CTGGTGGATC AGGACAAGGT GATTGGCGTG GTCGGGCACT TCTGTTCATC GTCAACCATC CCGGCGTCTG AGATCTATGA CGAAGCAGGC GTGATTGCCA TTACGCCCGG CTCGACCAAC CCGACAGTGA CCGAGCGTGG TCTGAAAGAT ATGTTCCGCA TGTGCGGTCG CGATGACCAG CAGGGTGTCG TTGCGGGGGA CTACATCGTC GACGTGCTCA AGGGCAAGAA AGTCGCCGTT ATCAATGACA AGGACACCTA CGGCAAGGGC CTCGCGGACG CAACGGCCGC TCAGTTGACC AAGCGTGGCG TCGAGCCGAT CCTCGAAGAG GGTCTGACCC GTGGCGAGAA AGATTTCAGT GCGCTGGTCA CGAAGATTCG TTCGGTAGAC GCTGACGTCG TGTACTTCGG CGGTCTGCAC CCGGAAGCCG GTCCTTTGGT TCGGCAGATG CGCGAGCAGG GCCTCAAGGA CGTCAAGTTC ATGTCCGATG ATGGCGTCGT GACCGACGAG CTGGTCACCA CTGCAGGTGG CGCACAGTAC GTCGATGGCG TGTACATGAC CTTCGGCGCG GACCCGCGTG CATTGCCGGA CAGCAAGGCT GTGGTGGATC AGTTCCGCAA GGCCGGTTAC GAGCCTGAAG GTTACACCCT CTACGCCTAC GCTTCGGTAC AGGCCCTGGC GGCCGGTTTC AATGGTGCCA AGTCCAACAA GGGTGACGCA GCCGCCACGT GGCTCAAGGC CAACCCGGTC AAGACCGTCA TGGGTGAAAA AGCCTGGGAT GCCAAGGGTG ACCTGAAAGT CTCCGACTAT GTGGTTTATC AGTGGGACGC CGCCGGCAAA TACAAGCAAC TCGAAAAACA GAAGTGA
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Protein sequence | MSHTFYRKGF LAIAVATALG VSSFAQADVK IGVAGPMTGA NASFGQQYMK GAQAAADAIN AAGGVNGEKI VLIAGDDACE PKQAVAVANR LVDQDKVIGV VGHFCSSSTI PASEIYDEAG VIAITPGSTN PTVTERGLKD MFRMCGRDDQ QGVVAGDYIV DVLKGKKVAV INDKDTYGKG LADATAAQLT KRGVEPILEE GLTRGEKDFS ALVTKIRSVD ADVVYFGGLH PEAGPLVRQM REQGLKDVKF MSDDGVVTDE LVTTAGGAQY VDGVYMTFGA DPRALPDSKA VVDQFRKAGY EPEGYTLYAY ASVQALAAGF NGAKSNKGDA AATWLKANPV KTVMGEKAWD AKGDLKVSDY VVYQWDAAGK YKQLEKQK
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