Gene Psyr_0573 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0573 
Symbol 
ID3366049 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp650892 
End bp652193 
Gene Length1302 bp 
Protein Length433 aa 
Translation table11 
GC content59% 
IMG OID637650913 
ProductGTP-binding protein, HSR1-related 
Protein accessionYP_233681 
Protein GI66043840 
COG category[R] General function prediction only 
COG ID[COG2262] GTPases 
TIGRFAM ID[TIGR03156] GTP-binding protein HflX 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.884333 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTTCTTTG AGCGCCACAG TGGTGGTGAA CGTGCAATTC TCGTTCATCT GGATGGTCAG 
GACCCTGAGG CGCGCGAAGA TCCGCAGGAG TTTCAGGAAT TGGCCATCTC GGCCGGTGCC
GATACCGTTG CGTTTATCAA CGTGCCGCGT CATCGGCCTT CGGCCAAGTA TCTGATCGGC
TCTGGCAAGG TCGAGGAGCT TCGCGATCAG GTCAAGGCCG AGCAGGCCGA TCTGGTCATC
TTCAATCACA CCCTCACGCC CAGTCAGGAA CGCAACCTCG AACGCGTTTT CGAGTGTCGT
GTGCTTGATC GTACCGGTCT GATTCTCGAT ATCTTTGCGC AGCGGGCGCG TACTCATGAG
GGCAAGCTTC AGGTCGAACT GGCCCAGCTT GAACACATGA GTACCCGTCT GGTCCGTGGC
TGGACTCACC TTGAGCGACA GAAAGGTGGT ATCGGCCTGC GCGGTCCGGG TGAAACCCAG
CTCGAAACCG ACCGACGTCT TCTGCGGGTT CGCCTGCGGC AGATCAAGGG ACGGCTGGAG
AAGGTTCGCA GCCAGCGTGA TCAGGCCCGT CGCGGGCGTC GTCGCGCGGA TATTCCATCG
GTTTCACTGG TGGGGTATAC CAACGCCGGC AAATCCACCC TGTTCAACTC GGTAACCGAT
TCGGATGTGT TCGCGGCGGA CCAACTGTTC GCCACGCTCG ATCCGACCTT GCGTCGTCTG
CAGCTCGATG ACCTGGGTCC TATCGTGCTG GCCGATACCG TGGGCTTTAT TCGCCACCTG
CCGCACAAGC TGGTCGAGGC CTTTCGCGCG ACGCTTGAAG AATCGAGCAA CTCCGATTTG
CTGCTGCATG TGATCGACTC CCACGAGCCG GATCGCATGT CGCAGATCGA GCAGGTGATG
GCGGTGCTCG GCGAGATCGG AGCCGAGGGC TTGCCGATCC TCGAGGTCTA TAACAAACTC
GATCTGCTTG AAGGCGTAGA GCCTCAGATA CAGCGCGATG CCGACGGCAA ACCGCAGCGT
GTCTGGGTGT CTGCCCGTGA TGGTCGAGGG CTTGATCTGC TCAAACAGGC TATCGCCGAA
TTGCTCGGCG ACGATCTGTT TGTCGGCACG CTGCTTCTGC CTCAAAGTCT TGCCCGGCTG
CGTGCCCAGT TCTTTGAACT GGGTGCGGTG CAGAGCGAAA CGCATGACGA GGAAGGTGCC
AGCGTGCTGG CCGTACGGCT GCCGCGCGTT GAACTCAATC GACTGGTGAG TCGCGAAGGA
TTGCAGCCGC TGGAGTTCAT CGAGCAACAC ACTTTGCAAT AA
 
Protein sequence
MFFERHSGGE RAILVHLDGQ DPEAREDPQE FQELAISAGA DTVAFINVPR HRPSAKYLIG 
SGKVEELRDQ VKAEQADLVI FNHTLTPSQE RNLERVFECR VLDRTGLILD IFAQRARTHE
GKLQVELAQL EHMSTRLVRG WTHLERQKGG IGLRGPGETQ LETDRRLLRV RLRQIKGRLE
KVRSQRDQAR RGRRRADIPS VSLVGYTNAG KSTLFNSVTD SDVFAADQLF ATLDPTLRRL
QLDDLGPIVL ADTVGFIRHL PHKLVEAFRA TLEESSNSDL LLHVIDSHEP DRMSQIEQVM
AVLGEIGAEG LPILEVYNKL DLLEGVEPQI QRDADGKPQR VWVSARDGRG LDLLKQAIAE
LLGDDLFVGT LLLPQSLARL RAQFFELGAV QSETHDEEGA SVLAVRLPRV ELNRLVSREG
LQPLEFIEQH TLQ