Gene Psyr_0564 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0564 
Symbol 
ID3366040 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp641096 
End bp641632 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content58% 
IMG OID637650904 
Productoligoribonuclease 
Protein accessionYP_233672 
Protein GI66043831 
COG category[A] RNA processing and modification 
COG ID[COG1949] Oligoribonuclease (3'->5' exoribonuclease) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGAACA AGCAGAACCT GATCTGGATC GATCTGGAAA TGACCGGTCT GGACCCTGAT 
ACCGATGTCA TTATCGAAAT GGCCACGATC ATCACCGATA GCGAGCTGAA CACCCTGGCC
GAAGGTCCGG TGATCGCTGT GCATCAGAGC GACGAAACGC TGGCGAAAAT GGATGAGTGG
AACACTCGCC AGCACGGCGG TTCGGGCCTG ACCCAGCGCG TGCGCGAAAG TACCGTCAGC
ATGGCTGAAG CCGAGGCGCA GACCCTTGAG TTCATCAAAC TGTGGGTGCC AGAGCGCAGT
TCGCCGATCT GCGGCAACAG CATCTGCCAG GATCGCCGCT TCCTGTATCG CCACATGCCG
ACGCTGGAAA ACTGGTTCCA CTACCGCAAT CTGGATGTCT CGACCCTCAA GGAACTGGCT
GCGCGCTGGT CCCCCGAGCT GAAATTCAAG AAAGGCAGCA CCCACCTGGC GCTCGACGAC
ATCCGTGAGT CGATTGCCGA GCTGCGCTTC TACCGTGAGC ACTTCATCAA GCCTTGA
 
Protein sequence
MQNKQNLIWI DLEMTGLDPD TDVIIEMATI ITDSELNTLA EGPVIAVHQS DETLAKMDEW 
NTRQHGGSGL TQRVRESTVS MAEAEAQTLE FIKLWVPERS SPICGNSICQ DRRFLYRHMP
TLENWFHYRN LDVSTLKELA ARWSPELKFK KGSTHLALDD IRESIAELRF YREHFIKP