Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_0564 |
Symbol | |
ID | 3366040 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 641096 |
End bp | 641632 |
Gene Length | 537 bp |
Protein Length | 178 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637650904 |
Product | oligoribonuclease |
Protein accession | YP_233672 |
Protein GI | 66043831 |
COG category | [A] RNA processing and modification |
COG ID | [COG1949] Oligoribonuclease (3'->5' exoribonuclease) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGAACA AGCAGAACCT GATCTGGATC GATCTGGAAA TGACCGGTCT GGACCCTGAT ACCGATGTCA TTATCGAAAT GGCCACGATC ATCACCGATA GCGAGCTGAA CACCCTGGCC GAAGGTCCGG TGATCGCTGT GCATCAGAGC GACGAAACGC TGGCGAAAAT GGATGAGTGG AACACTCGCC AGCACGGCGG TTCGGGCCTG ACCCAGCGCG TGCGCGAAAG TACCGTCAGC ATGGCTGAAG CCGAGGCGCA GACCCTTGAG TTCATCAAAC TGTGGGTGCC AGAGCGCAGT TCGCCGATCT GCGGCAACAG CATCTGCCAG GATCGCCGCT TCCTGTATCG CCACATGCCG ACGCTGGAAA ACTGGTTCCA CTACCGCAAT CTGGATGTCT CGACCCTCAA GGAACTGGCT GCGCGCTGGT CCCCCGAGCT GAAATTCAAG AAAGGCAGCA CCCACCTGGC GCTCGACGAC ATCCGTGAGT CGATTGCCGA GCTGCGCTTC TACCGTGAGC ACTTCATCAA GCCTTGA
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Protein sequence | MQNKQNLIWI DLEMTGLDPD TDVIIEMATI ITDSELNTLA EGPVIAVHQS DETLAKMDEW NTRQHGGSGL TQRVRESTVS MAEAEAQTLE FIKLWVPERS SPICGNSICQ DRRFLYRHMP TLENWFHYRN LDVSTLKELA ARWSPELKFK KGSTHLALDD IRESIAELRF YREHFIKP
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