Gene Psyr_0537 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0537 
Symbol 
ID3366013 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp606836 
End bp608260 
Gene Length1425 bp 
Protein Length474 aa 
Translation table11 
GC content63% 
IMG OID637650877 
Productbifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase 
Protein accessionYP_233645 
Protein GI66043804 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2870] ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase 
TIGRFAM ID[TIGR00125] cytidyltransferase-related domain
[TIGR02198] rfaE bifunctional protein, domain I
[TIGR02199] rfaE bifunctional protein, domain II 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.673885 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCTAT CCATGCCGCG CTTTGATCAG GCCCCTGTCC TGGTGGTGGG CGATGTCATG 
CTCGACAGAT ATTGGCATGG TGGTACCTCG CGTATTTCCC CTGAAGCGCC AGTGCCTGTG
GTCAAGGTCG ATCAGATCGA GGACCGTCCG GGTGGCGCTG CCAACGTGGC CTTGAACATC
GCTGCGCTGG GCGCACCGGC TTCGCTGGTC GGTGTGACGG GGGATGACGA AGCTGCCGAG
AGTCTGACCA ACAGCCTCAA GGCTGCTGGC GTGCTGGCGC GCTTTCAGCG CATCGCCGAT
CAGCCGACCA TCGTCAAACT GCGTGTCATG AGTCGCCACC AGCAACTGTT GCGCATCGAT
TTCGAAGAAC CGTTCAGGAC CGACCCGCTG GCCCTGAGCG CAGAGGTCTA TAGCTTGCTG
GATGGCATCA AGGTGCTGGT CCTGTCGGAT TACGGCAAGG GCGCACTGAA AAACCATCAG
GCGCTGATCC AGGCCGCCCG CAAGCGCGGC ATTCCGGTGC TGGCCGACCC CAAGGGCAAG
GATTTCGCGA TTTATCGCGG TGCCAGCCTG ATCACACCGA ACCTCAGCGA ATTCGAAGCC
ATCGTCGGCC ATTGTGTCGA TGAGGCACAA CTGGTCACCA AGGGGGCGCA GTTGATGCAG
GAGCTCGATC TCGGCGCGCT GCTGGTGACC CGTGGCGAAC ATGGCATGAC CTTGCTGCGT
CCTGATCAGC AGGCGCTGCA CCTGCCGGCC CGTGCCCGCG AAGTGTTCGA TGTGACCGGT
GCTGGCGATA CAGTGATTTC TACCCTGGCT GCGGCGATCG CTGCCGGTGA GGAACTGCCG
CATGCGGTAG CGCTGGCCAA TCTGGCCGCG GGCATCGTGG TCGGCAAGCT GGGCACCGCG
GCCATCAGCG CCCCCGAGCT GCGCCGTGCC ATTCAGCGCG AAGAGGGCTC CGAACGCGGC
GTGCTGGGGC TGGAGCAACT GCTGCTGGCG GTCGACGATG CGCGCGCGCA CAAGGAAAGG
ATCGTTTTCA CCAACGGCTG TTTCGACATT CTCCACGCCG GTCATGTGAC CTATCTGGAG
CAGGCGCGCG CCTTGGGCGA TCGCCTGATC GTTGCCGTCA ACGACGATGC GTCCGTCAGC
CGCCTGAAAG GGCCGGGCCG ACCGATCAAC AGCGTCGAAC GGCGCATGGC GGTGCTGGCA
GGTCTGGGAG CCGTGGACTG GGTCATCAGC TTCCCGGAAG GAACCCCGGA AAACCTGCTG
ACTCACGTCA AGCCCGACGT GCTGGTCAAG GGCGGTGATT ACGGTGTCGA TCAGGTGGTC
GGTGCCGATA TCGTTCAGGC GTACGGCGGC GAAGTGCGTG TGCTGGGGCT GGTGGAAAAC
AGCTCCACCA CCGCGATCGT CGAAAAGATT CGAGGGCAGG GGTAG
 
Protein sequence
MKLSMPRFDQ APVLVVGDVM LDRYWHGGTS RISPEAPVPV VKVDQIEDRP GGAANVALNI 
AALGAPASLV GVTGDDEAAE SLTNSLKAAG VLARFQRIAD QPTIVKLRVM SRHQQLLRID
FEEPFRTDPL ALSAEVYSLL DGIKVLVLSD YGKGALKNHQ ALIQAARKRG IPVLADPKGK
DFAIYRGASL ITPNLSEFEA IVGHCVDEAQ LVTKGAQLMQ ELDLGALLVT RGEHGMTLLR
PDQQALHLPA RAREVFDVTG AGDTVISTLA AAIAAGEELP HAVALANLAA GIVVGKLGTA
AISAPELRRA IQREEGSERG VLGLEQLLLA VDDARAHKER IVFTNGCFDI LHAGHVTYLE
QARALGDRLI VAVNDDASVS RLKGPGRPIN SVERRMAVLA GLGAVDWVIS FPEGTPENLL
THVKPDVLVK GGDYGVDQVV GADIVQAYGG EVRVLGLVEN SSTTAIVEKI RGQG