Gene Psyr_0468 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0468 
Symbol 
ID3365944 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp506590 
End bp507798 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content61% 
IMG OID637650808 
Productaminotransferase 
Protein accessionYP_233576 
Protein GI66043735 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0436] Aspartate/tyrosine/aromatic aminotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGACC AAGGTTCGCC GCGCCGCTTT GCGCGCATCG ATCGACTCCC CCCTTACGTG 
TTCAACATCA CCGCCGAGCT GAAAATGGCT GCTCGTCGTC GCGGTGAGGA CATTATCGAC
CTGAGCATGG GCAACCCCGA CGGGGCCACA CCGCCGCACA TCGTCGACAA GCTGATCACC
GTCGCCCAGC GCGAAGACAC CCACGGCTAC TCCACCTCGC GCGGCATTCC ACGCCTGCGC
CGGGCGATTT CCAACTGGTA CAAGAAACGC TACGAGGTCG ACATCGACCC TGAAAGCGAA
GCAATCGTGA CCATTGGTTC CAAGGAAGGC CTGGCCCACC TGATGCTCGC CACACTGGAC
CAGGGCGACA CGGTGCTGGT GCCCAACCCC AGTTACCCGA TCCACATCTA CGGTGCCGTG
ATTGCCGGCG CCCAGGTGCG ATCGGTGCCG CTGGTGCCTG GCGTGGACTT CTTCGACGAG
CTGGAAAAAG CCATTCGCGG CTCGATTCCC AAGCCGAAGA TGATGATTCT GGGCTTTCCG
TCCAACCCGA CTGCGCAATG TGTGGAGCTG GACTTCTTCG AGCGCGTGGT GGCCCTGGCC
AAACAGTACG ACGTGCTGGT GGTGCATGAC CTGGCGTACG CCGACATCGT CTACGATGGC
TGGAAAGCCC CGTCGATCAT GCAGGTGCCG GGTGCCAAGG ACATTGCCGT GGAGTTCTTC
ACCCTGTCCA AGAGCTACAA CATGGCCGGC TGGCGGATTG GTTTCATGGT CGGCAACCCC
GAACTGGTGA ATGCACTGGC GCGGATCAAG AGTTACCACG ACTACGGTAC CTTCACGCCA
CTGCAGGTGG CTGCGATTGC CGCTCTGGAA GGCGATCAGC AATGCGTGCT CGACATTGCC
GAGCAGTATC GCCAACGCCG CAACGTACTG GTCAAGGGCT TGCACGAACT GGGCTGGATG
GTCGAGAACC CCAAGGCCTC GATGTACGTC TGGGCGAAGA TTCCACAGGC CTATGCGCAC
CTGGGTTCGC TGGAGTTCGC CAAGAAGCTG TTGGCCGAAG CCAAGGTGTG TGTCTCGCCG
GGCATCGGTT TCGGTGAGTA CGGCGACGAT CATGTGCGCT TCGCCCTGAT CGAGAACCAG
GACCGCATCC GCCAGGCCGT TCGTGGCATC CGCAGCATGT TCAGGGCCGA CGACAAGCTC
AAGTCCTGA
 
Protein sequence
MADQGSPRRF ARIDRLPPYV FNITAELKMA ARRRGEDIID LSMGNPDGAT PPHIVDKLIT 
VAQREDTHGY STSRGIPRLR RAISNWYKKR YEVDIDPESE AIVTIGSKEG LAHLMLATLD
QGDTVLVPNP SYPIHIYGAV IAGAQVRSVP LVPGVDFFDE LEKAIRGSIP KPKMMILGFP
SNPTAQCVEL DFFERVVALA KQYDVLVVHD LAYADIVYDG WKAPSIMQVP GAKDIAVEFF
TLSKSYNMAG WRIGFMVGNP ELVNALARIK SYHDYGTFTP LQVAAIAALE GDQQCVLDIA
EQYRQRRNVL VKGLHELGWM VENPKASMYV WAKIPQAYAH LGSLEFAKKL LAEAKVCVSP
GIGFGEYGDD HVRFALIENQ DRIRQAVRGI RSMFRADDKL KS