| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_0464 |
|---|
| Symbol | |
|---|
| ID | 3365940 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | - |
|---|
| Start bp | 502892 |
|---|
| End bp | 503530 |
|---|
| Gene Length | 639 bp |
|---|
| Protein Length | 212 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637650804 |
|---|
| Product | putative aldolase |
|---|
| Protein accession | YP_233572 |
|---|
| Protein GI | 66043731 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0235] Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCGATG AAAACGCACT GCGTCAGGAA ATCTGCGACG TCGGCCGTTT GCTGTATGGC
CGCGGCTATA CGGTGGGCAG CGCCGGCAAC ATCAGCGCAC GACTCGACGA CGGCTGGCTG
ATTACCCCGA CCGACGCCTG CCTGGGGCGC ATGGACCCGG CCGATATCGC CAAGGTCAAT
CTGGCCGGTG AATGGGTGTC TGGCAGCAAG CCGTCCAAAA CCCTGGCCTT GCACCGCGAG
GTCTACGACC GCAATCCGCA GGTCGGTGGT GTGGTGCACA CGCACTCGAC GCATCTGGTC
GCCCTGACCC TGGCCGGGGT GTGGCAGGAA GACGACATTC TGCCGCCGCT GACGCCGTAC
CAGGTCATGA AGGTCGGGCA TATCCCATTG ATCCCTTACG AGCGTCCGGG CTCGCCGAAA
GTCGCCGAGC GCGTGGCGGA ACTGGCCAAC AGCGTGCGCG GCGTGATGCT GGAGCGCCTC
GGTCCGGTGG TCTGGGAAAG CTCGGTGGCC AAGGCCTGCT ATGCCTTGGA GGAGCTGGAA
GAGACTGCCC GTCTGTGGCT GATGAGCAAC CCCAAACCTG CACCGCTGGC CCCGGCGGCG
CTTGAAGAGC TGCGTCAGGT GTTCGACGCC AGGTGGTAA
|
|---|
| Protein sequence | MIDENALRQE ICDVGRLLYG RGYTVGSAGN ISARLDDGWL ITPTDACLGR MDPADIAKVN
LAGEWVSGSK PSKTLALHRE VYDRNPQVGG VVHTHSTHLV ALTLAGVWQE DDILPPLTPY
QVMKVGHIPL IPYERPGSPK VAERVAELAN SVRGVMLERL GPVVWESSVA KACYALEELE
ETARLWLMSN PKPAPLAPAA LEELRQVFDA RW
|
|---|
| |