Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_0453 |
Symbol | |
ID | 3365929 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 488697 |
End bp | 489416 |
Gene Length | 720 bp |
Protein Length | 239 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637650793 |
Product | 16S ribosomal RNA methyltransferase RsmE |
Protein accession | YP_233561 |
Protein GI | 66043720 |
COG category | [S] Function unknown |
COG ID | [COG1385] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR00046] RNA methyltransferase, RsmE family |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGACTGT CGCGCTTTTT TACTGAAACG CCGCTGAGTC TGGGCGAGCA TGAACTGCCT GAGGCCCAGG CGCATTACAT CAGCCGCGTG CTGCGCATGA CCGAAGGTGA CGCGCTGCAA CTGTTCGACG GGTCGGGCCA GGAGTTTCGC GGCACGTTGC TGGAAGTCGG CAAGAAGCGC GTGCATGTGC AGCTCACCGA AAGCTTCGCG GGGCAGGTGG AGTCAGGCCT GCGCATTCAT CTCGGTCAAG GCCTGTCGCG CGGCGAGCGG ATGGACTGGG CCATTCAAAA AGCCACCGAG CTGGGCGTCA GCGAAATTAC GCCGATTGTC AGCGAACGCT GCGAGGTGCG CCTCAAGGAC GAACGTGCCG AGAAGCGCCA GGCACACTGG CAGCAGATCG CGATCAGCGC CTGTGAGCAA TGTGGTCGCT CCGTGGTGCC GGTGATTCAT GCACCGATGC CGCTGGCCGA GTGGATCAAG CACACCGAAG CCGACCTGAA ACTGGTCCTG CACCCGGTGG CCGAACCCCT GACCAGCCAT GACAAGCCCG CCAGTCTGGC CTTTCTGATT GGTCCGGAAG GCGGTCTGAA CGATGCGGAA GTCACTCAGG CGCAAGACGC AGGCTTCCAC GCCGCGCGCC TCGGCCCACG CGTGCTGCGC ACTGAAACCG CTCCCGTGGT CGCGCTCAGC GTGGCACAAC AGCTGTGGGG CGATTTTTGA
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Protein sequence | MRLSRFFTET PLSLGEHELP EAQAHYISRV LRMTEGDALQ LFDGSGQEFR GTLLEVGKKR VHVQLTESFA GQVESGLRIH LGQGLSRGER MDWAIQKATE LGVSEITPIV SERCEVRLKD ERAEKRQAHW QQIAISACEQ CGRSVVPVIH APMPLAEWIK HTEADLKLVL HPVAEPLTSH DKPASLAFLI GPEGGLNDAE VTQAQDAGFH AARLGPRVLR TETAPVVALS VAQQLWGDF
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