Gene Psyr_0419 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0419 
Symbol 
ID3365895 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp457693 
End bp458958 
Gene Length1266 bp 
Protein Length421 aa 
Translation table11 
GC content54% 
IMG OID637650759 
Producthypothetical protein 
Protein accessionYP_233527 
Protein GI66043686 
COG category[R] General function prediction only 
COG ID[COG3950] Predicted ATP-binding protein involved in virulence 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.247719 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCTCG ACCGCCTCCA CCTGCAGAAT TTTCGTTGCT ACGAAGATGC TCATTTCGAC 
TTCCAGCCTG GGTTCAATCT GGTGGTGGGG GTTAATGGCA GTGGGAAGAC GTCGTTATTG
CTGGGGGTGG CGGGATGCTT CGGGAATCTA CTTGGAAGCA TTGGCGTCCA TCGACCATCG
ATAGCCGAGT CCGATGTTCG GTTCGAGTTA GTAAAGTTCG AAGACAGGAT TCGTTTTGAG
CGCAGCTATC CTCTTGTGTT GACTGCCCAA GGTGGCGCGT TTGAGCATCA GGAATGGCAC
GTATCGCTAG AACGCAGCAG TCTTCAGACA AATTTTAGCG CGCTGAACAG TCTCGTATTT
TCGGAAAATC TGATCAGCAT CGACGGCGCT ACTCACGGGG ATTTGCCTGT ATTCGCCGTC
TATCAAGCCA ATCGACGCTG GCTGACGATG AGTGTAACCG CTGAGCATGC TGCACAGAGC
AAACCATCAA GACTGGATGC CTACACCTCT TGGTTCGATG CCGCTTCCAA CTTGAAAAAC
TTCGAGACCT GGTTCATCGG CAAGACACTG GAGCGCTTTC AAAGACTGGC CAGAACGGGT
TTCCCTGGCA TTCTCACCGA CGAACTCACC TGGATCAATT CAGCTATCCA GTGCGCACTG
CCGGAGTCCA AGGGCATAGA GTACGACATG GAAATGCGGG GGCTGATGGT GGACATTGAT
GACCGAAAAA CCCCGTTCAA CGACCTGAGC GACGGGCAAC GCGGAATGGT CGCCCTCTTC
GCCGATATTG CCCGCCGTAT CTGCCTGCTA AATCCGCACA TGGGGAAGGA TGTTCTAAGC
AAGACAAACG GCATCATCGT GATCGATGAA CTGGACATCC ACCTTCACCC CGGCTGGCAA
CGCACCATTG CACCCGCGCT GAAAAAAGCA TTTCCCAGCA TTCAGTTCAT CGCTGCCAGC
CACTCGCCAC AGGTCATCGG CAGCCTGCAA CCGGGCGAGG TCATCCTGCT GAATAACCAT
GACGGCTCTC ACCCAAGAGC AACCTACGGC CTGGACTCCA GCAGCATTCT GGAAGAAGTC
ATGGGCGTGC CTCAGCGTGA GCCTGAAATT GAAGAGTTGC TCGATCAGCT ATTCAGCACT
CTGGAAAACA ACGAGCTTGA AAAAGCCAGG TCGCAGCTTG ATGCACTGAA GAAGAAGGCG
CCCGATCTAC CAGAGTTCGC GGGTGCCGAG GCGCTACTCA AACGCAAGGA GATCATTGGA
CGATGA
 
Protein sequence
MRLDRLHLQN FRCYEDAHFD FQPGFNLVVG VNGSGKTSLL LGVAGCFGNL LGSIGVHRPS 
IAESDVRFEL VKFEDRIRFE RSYPLVLTAQ GGAFEHQEWH VSLERSSLQT NFSALNSLVF
SENLISIDGA THGDLPVFAV YQANRRWLTM SVTAEHAAQS KPSRLDAYTS WFDAASNLKN
FETWFIGKTL ERFQRLARTG FPGILTDELT WINSAIQCAL PESKGIEYDM EMRGLMVDID
DRKTPFNDLS DGQRGMVALF ADIARRICLL NPHMGKDVLS KTNGIIVIDE LDIHLHPGWQ
RTIAPALKKA FPSIQFIAAS HSPQVIGSLQ PGEVILLNNH DGSHPRATYG LDSSSILEEV
MGVPQREPEI EELLDQLFST LENNELEKAR SQLDALKKKA PDLPEFAGAE ALLKRKEIIG
R