| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_0414 |
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| Symbol | hemE |
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| ID | 3365890 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 451965 |
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| End bp | 453029 |
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| Gene Length | 1065 bp |
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| Protein Length | 354 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637650754 |
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| Product | uroporphyrinogen decarboxylase |
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| Protein accession | YP_233522 |
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| Protein GI | 66043681 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0407] Uroporphyrinogen-III decarboxylase |
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| TIGRFAM ID | [TIGR01464] uroporphyrinogen decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGCCC TGAAGAACGA CCGTTTCCTT CGCGCTTTGC TCAAGCAACC CGTAGACGTC
ACGCCGGTAT GGATGATGCG TCAGGCAGGT CGTTACCTGC CGGAATACCG CGCCAGCCGC
GCCAGTGCCG GGGATTTCAT GAGCCTGTGC AAGAACCCGC AGTTCGCCTG TGAAGTCACC
CTGCAGCCGC TGGATCGCTA CCCGCTGGAC GCGGCGATTC TGTTCTCCGA CATCCTGACC
ATTCCTGATG CGATGGGCCA GGGGCTGTAC TTCGAAACCG GCGAAGGCCC GCGTTTCAGG
AAAACCGTGA GCACACTCGC TGACATCGAA GCACTGCCGA TCCCCGATGC GCAGCAGGAT
CTGGGCTACG TGATGGATGC GGTCAGCACC ATTCGCCGCG AACTCAACGG TCGTGTACCG
CTGATCGGTT TCGCCGGCAG CCCGTGGACG CTGGCGACCT ACATGGTCGA GGGCGGTTCG
TCGAAGGACT TCCGCAAGTC CAAGGCCATG CTCTACGACA ACCCGCAAGC CATGCACCTG
CTGCTCGACA AGCTGGCGCA GTCAGTCACC TCCTACCTCA ATGGCCAGAT TCTGGCCGGT
GCGCAGGCCG TGCAGATCTT CGACAGCTGG GGCGGCAGCC TGTCTTCGGC GGCGTATCAG
GAGTTCTCGC TGGCCTACAT GCGCAAGATC GTCAGCGGCC TGATCCGCGA AAACGACGGG
CGCAAGGTGC CGGTCATCGT CTTCACCAAA GGCGGCGGTC TGTGGCTGGA AAGCATCGCC
GACATCGGTG CAGATACTCT TGGACTGGAC TGGACCTGCG ACATCGGCGA AGCGCGTCAG
CGTGTCGGCA GCAAGGTTTC GCTGCAAGGC AACATGGACC CGACCGTACT CTACGCCCGC
CCGGAAGCCA TCCGCCAGGA AGTCGCACGC ATCCTTGCCA GCTACGGCAG CGGCACCGGC
CACGTCTTCA ACCTCGGCCA CGGCATCACC CCTGAAGTCG ACCCGGCCAA TGCCGGCGCG
TTCATCAACG CGGTGCATGA GTTGTCGGCG CAGTATCACG TGTAG
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| Protein sequence | MTALKNDRFL RALLKQPVDV TPVWMMRQAG RYLPEYRASR ASAGDFMSLC KNPQFACEVT
LQPLDRYPLD AAILFSDILT IPDAMGQGLY FETGEGPRFR KTVSTLADIE ALPIPDAQQD
LGYVMDAVST IRRELNGRVP LIGFAGSPWT LATYMVEGGS SKDFRKSKAM LYDNPQAMHL
LLDKLAQSVT SYLNGQILAG AQAVQIFDSW GGSLSSAAYQ EFSLAYMRKI VSGLIRENDG
RKVPVIVFTK GGGLWLESIA DIGADTLGLD WTCDIGEARQ RVGSKVSLQG NMDPTVLYAR
PEAIRQEVAR ILASYGSGTG HVFNLGHGIT PEVDPANAGA FINAVHELSA QYHV
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