Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_0400 |
Symbol | |
ID | 3365876 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 428135 |
End bp | 428938 |
Gene Length | 804 bp |
Protein Length | 267 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637650740 |
Product | nuclease |
Protein accession | YP_233508 |
Protein GI | 66043667 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1525] Micrococcal nuclease (thermonuclease) homologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.246467 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCATCT CCAGGCTGCT TGAAAAGGCG CTCCTTGTGG GCGTCTTTTT TATGCCCGCG ATTTGGGTGT CCGCTGCGCA GGCCTTCTGC CCCGCACCTG CCTCCTTGCC GATTGCACAG GTGCAGCGTG TGGTCGACGG CGACACGTTA AAGCTGACCG ATGGCCGCAG TGTGCGGATG ATCGGGCTCA ATACGCCTGA AACCGGCAGG AAAGGCCGGT CGGCCGAACC GTTTGCCGAG GCGGCGAAAA AGCGCTTGCA GACGCTGGTG AATGAAAGCG GCGGCAAGGT CAGGCTGCGT ATCGGCCAGC AGGGCAAGGA TCATTACGGT CGCACGCTGG CCAACGTCTA TGACCGTAAG GGCGCCAACC TCGAGGCGCA GTTGCTGAGT GAAGGTCTGG GCTATCTGGT GGCCGTTGCG CCCAATGTCA GGCTGGTCGC TTGCCAGCAG GGCGCGGAGC GTCAGGCACG TGAGGCGCGG CTGGGTGTGT GGCGCAATTC GCCGGTGCAG TCCTCGACCC GGCTGAGCAA AGGCGGGTTC GCGATTGTGT CCGGTCAGGT CAGGCGTGTG CAGCGCAATC GCGGCGGTAT CTGGATCGAG TTGCAGGGCT CGCTGGTCCT GCGTGTCGCG CCTGCCCACC TGAATGCGTT CGATACGGCG ATGCTCCAGC GCCTCGAAGG GCAGCAGGTC GAAGCGCGTG GCTGGGTAGT CGACCGCTCC CGGCGCGCGG GCCTGAAAGC CGGGCAGTCC CGCTGGCTGC TGCCACTGAC CCATCCCGCA ATGCTGAGCC CTTCCCGCCG TTAG
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Protein sequence | MGISRLLEKA LLVGVFFMPA IWVSAAQAFC PAPASLPIAQ VQRVVDGDTL KLTDGRSVRM IGLNTPETGR KGRSAEPFAE AAKKRLQTLV NESGGKVRLR IGQQGKDHYG RTLANVYDRK GANLEAQLLS EGLGYLVAVA PNVRLVACQQ GAERQAREAR LGVWRNSPVQ SSTRLSKGGF AIVSGQVRRV QRNRGGIWIE LQGSLVLRVA PAHLNAFDTA MLQRLEGQQV EARGWVVDRS RRAGLKAGQS RWLLPLTHPA MLSPSRR
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