Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_0398 |
Symbol | |
ID | 3365874 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 425511 |
End bp | 427730 |
Gene Length | 2220 bp |
Protein Length | 739 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637650738 |
Product | primosome assembly protein PriA |
Protein accession | YP_233506 |
Protein GI | 66043665 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1198] Primosomal protein N' (replication factor Y) - superfamily II helicase |
TIGRFAM ID | [TIGR00595] primosomal protein N' |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.844316 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCCGACG CCATCCTGCG CCTTGCCCTG CCCTCGCCGC TTCGCCGCCT GTTCGACTAC CGCGCCCCCG CGGGCGTGTC GCGCAGCGCC TTGCAGCCGG GCATGCGTCT GCGAGTGCCG TTCGGACGTC GGGAAATGAT CGGCATTCTG GTGGAAGTGG TCGATCACAG CGAAGTACCC GCCGACAAGC TGAAGCCGGC TATCGCCCTG CTCGACAGTG AAGCGCCGCT GCCGCCCGCA CTGTTCAAGC TGTGCCTGTG GACCTCGCAG TACTACCAGC ACAGCCTCGG AGACACACTG AGCTGGGCCT TGCCGGTGCT GCTGCGTCAG GGCGAACTGG CCGAAAGTCG CCAAGAGCGC TTCTGGCATG TGGCCCCGGG CGCCAGCGTC GACGATCCGC GCATCGCCCG CGCGCCCAAG CAGCGCGAAG CCCTGACCAC CCTTGCCCAG CACCCGCACG GAGTGGCGCA TCAACTGCTC AGCAAGCTGA TGCTTAACAG GGACAGCCTC AACCTGTTGC TGGCCAAGGA GCTGGTGTAC GTCGAGGTCC GCAGCCATGC GCCCAGCGCA CGCCATGAAC ACTGGCTGGC CCAGCCTGAA TTGCCACTCA ACACCGAACA ACGCGCCGCT TACGAAGCGA TCCGCGCCGG ATTCGACAGC TTTCATGCGT TTCTGCTGGC CGGTGTCACC GGCAGCGGCA AGACCGAAGT CTATCTGCAA CTGATCCGCG AAACCCTCGA AGCCGGCAAG CAGGCGCTGG TGCTGATCCC GGAAATCAAC CTCGGCCCGC AGACCCTGGC GCGCTTCGAG CAACGCTTCA ATGCGCGCAT TGCGCTGATC CACTCGGCGG TCAACGACCG CGAACGGCTG GACGCCTGGC TGGCGGCTCG CGATGGCGAG GCGGACATCA TCATCGGCAC GCGTTCGGCG CTGTTCACGC CGATGAAAAA CCCCGGCCTG ATCATCATCG ACGAAGAACA CGACGGTTCC TATAAACAGC AGGAAGGTCT GCGCTATCAC GCCCGCGATC TGGCACTGGT GCGGGCGCGT CAGGAAAACA TTCCGATTGT CCTGGGCTCG GCCACGCCGT CCCTGGAAAG CCTGCACAAC GCCTACACCG GCCGCTATGG CCTGTTGCGC CTGAATCAGC GCGCGGGCGG CGCACAACAG CCGCGTTTCA TGCGCCTGGA CGTCAAGAGC CGACCGCTGG ACAGCGGCAT CTCCGGGCCC ATGCAGCAGG CCATCGGCCA GACGCTCGCG GCAGGCCAGC AGGTCTTGGT GTTCCTCAAC CGTCGCGGCT TTGCGCCAAC CTTGCTGTGC CACGACTGCG GCTGGATGTC CGGCTGCCAA CGCTGCGATG CACGCATGAC CGTGCACCAG CGCTCGGGCG AACTGCGCTG CCATCACTGC GGGTATGTCG AGCGCGTACC GCGGCAGTGC CCGTCGTGCG GCAAGGTGGA TTTGCGCCCG GTAGGCGCCG GCACCGAGCG CGCCGAAGAA CGCCTGGCGA TTCTGTTTCC GGACTACCCC GTGCTGCGTG TCGATCGCGA CAGCACGTCG CGCAAGGACG CCATGAACCA GCTGTTCACG ACGATCCAGC GCGGTCAGCC GTGCATTCTG GTCGGCACGC AAATGCTCGC CAAGGGCCAT CACTTTCCCC GGGTCACCCT GGTCTCGATT CTGGACGCCG ACGGCGGGCT GTTTTCCGGC GACTTCCGCG CCAGCGAGCG CATGGCGCAA CTGATCGTGC AGGTGGCAGG CCGTGCCGGG CGCGCCGAAG AGCCTGGCAA GGTGATCATC CAGACCCACC TGGCCGACCA TCCGTTGCTG ATCCAGCTGA CCGAGCAGGG TTATTTCGCC TTTGCCGAAC AAGCCTTGAG CGAGCGCCGT TCAGCGAGTC TGCCACCGTT TTCACACCTT GCACTGCTGC GCGCCGAAGC GCACAAGCCG GGACAGGCCG AGACCTTTCT CGATCAGGCC TGCAGCGATG CCGAGCAACT GGTTGCGCAA ATGGCGCTGG GCGGCATAGA GCTGCTGGGC CCGGTTCCGG CCCCGATGGA ACGCCGCGCC GGCCGTTATC GCGCGCAACT GCTGGTGCAG TCCAGCGCCC GCGCGCCACT GCATAAATTG CTTGCCACCT GGCTGCTCGC ACTGGAGCAA ATGCCCAGCG GTCGACAGGT CAGATGGTCG CTGGATGTGG ATCCCGTGGA TCTTTATTAA
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Protein sequence | MPDAILRLAL PSPLRRLFDY RAPAGVSRSA LQPGMRLRVP FGRREMIGIL VEVVDHSEVP ADKLKPAIAL LDSEAPLPPA LFKLCLWTSQ YYQHSLGDTL SWALPVLLRQ GELAESRQER FWHVAPGASV DDPRIARAPK QREALTTLAQ HPHGVAHQLL SKLMLNRDSL NLLLAKELVY VEVRSHAPSA RHEHWLAQPE LPLNTEQRAA YEAIRAGFDS FHAFLLAGVT GSGKTEVYLQ LIRETLEAGK QALVLIPEIN LGPQTLARFE QRFNARIALI HSAVNDRERL DAWLAARDGE ADIIIGTRSA LFTPMKNPGL IIIDEEHDGS YKQQEGLRYH ARDLALVRAR QENIPIVLGS ATPSLESLHN AYTGRYGLLR LNQRAGGAQQ PRFMRLDVKS RPLDSGISGP MQQAIGQTLA AGQQVLVFLN RRGFAPTLLC HDCGWMSGCQ RCDARMTVHQ RSGELRCHHC GYVERVPRQC PSCGKVDLRP VGAGTERAEE RLAILFPDYP VLRVDRDSTS RKDAMNQLFT TIQRGQPCIL VGTQMLAKGH HFPRVTLVSI LDADGGLFSG DFRASERMAQ LIVQVAGRAG RAEEPGKVII QTHLADHPLL IQLTEQGYFA FAEQALSERR SASLPPFSHL ALLRAEAHKP GQAETFLDQA CSDAEQLVAQ MALGGIELLG PVPAPMERRA GRYRAQLLVQ SSARAPLHKL LATWLLALEQ MPSGRQVRWS LDVDPVDLY
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