Gene Psyr_0358 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0358 
Symbol 
ID3365834 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp383399 
End bp384196 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content56% 
IMG OID637650700 
Productcystine transporter subunit 
Protein accessionYP_233468 
Protein GI66043627 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.95727 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACATTT CCGCTATTCG TCGTACGTTT CTTTTTTCGG CAATGGGCTT GATGCTCAGT 
GCCGGTATCG CCGGGCAAGC CATGGCTGGC GAGCAACTGC AGAAAATCAA GGACAGCGGT
ACGCTCAATG TCGGCCTGGA AGGCACTTAC CCACCGTTCA GCTTTGTGGA TGAGAGCGGC
AAGCTCACCG GCTTCGAAGT CGAGTTTTCC GAAGCGCTGG CCAAGGAACT GGGTGTCAAG
GCCAAGATCC AGCCGTCGAA GTGGGATGGC ATCCTGGCCG CTCTGGACTC CAAGCGTCTG
GACGTGGTGA TCAACCAGGT GACCATCTCC GACGAGCGCA AGAAGAAGTA CGACTTCTCC
GAGCCCTACA CCATTTCCGG CATCCAGGCG CTGGTTCTGA AGAAGAACGC AGACACCATC
AAGTCTGTCA AAGACCTGAG CGGCAAGAAG GTGGGCGTGG GTCTGGGCAC CAACTACGAG
GAATGGCTCA AGGCGAACGT TCCGGACGCA ATCGTCAAAA CCTATGACGA TGACCCGAGC
AAGATCCAGG ACCTGAGCGT AGGTCGTATC GATGCGATCC TCGTTGACCG TCTGGCCGCC
CTGGAAATGG CTGCCAAGAC AAAAAACAAA CTCGTCCCGG CAGGCGAAGC ATTTTCCCGC
CAGGCATCGG GTATTGCCCT GCGTAAAGGC GAGCCTGAAT TGCTGGCGGC CATCGACAAG
GCCATCGACA AACTGCGTGC CGACGGCACG CTGAAGAAGC TGTCGGAAAA GTACTTCAAT
GCTGATGTCA CCCAATGA
 
Protein sequence
MNISAIRRTF LFSAMGLMLS AGIAGQAMAG EQLQKIKDSG TLNVGLEGTY PPFSFVDESG 
KLTGFEVEFS EALAKELGVK AKIQPSKWDG ILAALDSKRL DVVINQVTIS DERKKKYDFS
EPYTISGIQA LVLKKNADTI KSVKDLSGKK VGVGLGTNYE EWLKANVPDA IVKTYDDDPS
KIQDLSVGRI DAILVDRLAA LEMAAKTKNK LVPAGEAFSR QASGIALRKG EPELLAAIDK
AIDKLRADGT LKKLSEKYFN ADVTQ