Gene Psyr_0348 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0348 
Symbol 
ID3365824 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp372774 
End bp373400 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content63% 
IMG OID637650690 
Producthypothetical protein 
Protein accessionYP_233458 
Protein GI66043617 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2227] 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.11153 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTCG ACCCACAGAC CCTTGCGCAG ATCACCGCCG CGACCCTCGG CAACTACAAC 
AGCGTGGCCG ACGACTTCCG CGCAGGCACC CGCGACCACG ACGTCAGCCA GAATATCGAC
GCGCTGCTGC GCCATATCGA AGGACCGACG CCCTGGCAGA TTCTCGACTT CGGCTGCGGG
CCGGGGCGTG ATCTGAAGGC GTTTACCGCG ATGGGCCATG TGGCGGTCGG GCTCGACGGC
TCCGAACGTT TCGCAGAGAT GGCCCGCGCC GAGACCGGCT GCGAAGTGGT GCAGCAAAAC
TTCCTCGAAC TCGACCTGCC GCAAGGCCGC TTCGATGGCC TCTTCGCCAA TGCAGTGTTA
TTCCACATCC CCAAACAGGA GCTGCCGCGC GTCCTGCGTC AGTTGCATGC CACGCTCAAA
CCGGGCGGCG TGCTGTTCAG CTCCAATCCG CGCGGTGAGA ATCAGGAAGG CTGGAACGGC
GAACGTTACG GCGCTTATCA CGACCTGGAA TCATGGCGAA AATTGCTGAC CGAAGCCGGC
TTTGTCGAAC TGGAGCACTA CTACCGTCCC GCCGGGCTGC CGAGGGAGCA GCAACCATGG
CTGGCAAGTG TCTGGCGGCG TCAGTGA
 
Protein sequence
MKLDPQTLAQ ITAATLGNYN SVADDFRAGT RDHDVSQNID ALLRHIEGPT PWQILDFGCG 
PGRDLKAFTA MGHVAVGLDG SERFAEMARA ETGCEVVQQN FLELDLPQGR FDGLFANAVL
FHIPKQELPR VLRQLHATLK PGGVLFSSNP RGENQEGWNG ERYGAYHDLE SWRKLLTEAG
FVELEHYYRP AGLPREQQPW LASVWRRQ