| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_0336 |
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| Symbol | |
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| ID | 3365812 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | - |
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| Start bp | 355995 |
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| End bp | 358982 |
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| Gene Length | 2988 bp |
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| Protein Length | 995 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637650678 |
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| Product | Outer membrane autotransporter barrel |
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| Protein accession | YP_233446 |
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| Protein GI | 66043605 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4625] Uncharacterized protein with a C-terminal OMP (outer membrane protein) domain |
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| TIGRFAM ID | [TIGR01414] outer membrane autotransporter barrel domain
[TIGR02601] autotransporter-associated beta strand repeat |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.988518 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGACCTGC TCTCGGGGTT CAACACCCTG TGGACAACCG GCGCAACCTG GGACACCGGT
ACGCCCACCG CCCTGGGTCA GAGCCTGCTT CGGCGCAACC TGCAGATCGT GGTCGACCGC
GCCAACTCGC GCACGCTGGC GCAGGAAACC GCTGCCTACT TCGATGACCG CCGCGACCAG
AGCTACAGCG CCATCAGCGG CCTGGGCTCG CTGAGCGATG CTTATAAAGC CGGCGCGGGC
GCGTTCACGA CGATTACGCA ATTCGACGAC AGCAACAAAA CCGTCAGGTA CGACGACAAG
GGCAATGGCG CAGGCAGTTC GTCTTCGGCG CTGGGCAAGG TGGTCGATCT GGTCGGCGCG
GTGCGCAATG ATGCGTCCAC GACCCCGGCC AAGTCCCACT ATCTGTATCC ACGGCCATGG
CGGCAGAGCC TCGACGGACA GAGCCTGGCA TTCGTCGTCG CGCCCTCCCT GCGCCCGGCC
GAAAGCACCA CGCCGGCCAG TGACTCGGGT TTCCCCAGCG GTCACACCAA CGCTGCTTAC
CTGTCAGCCT ACGCATTGGC CTACGCGATC CCCGAGCGGT TCAGCGAGTT GATGCTGCGT
GCTTCGGAGA TCGGCGACAA CCGCATCGAA GCGGGCATGC ACTCGCCCTT CGACGTGATG
GGCGGGCGAA TCACCGCGAC CTATTTCGCC ATCGACAACC TGTCCAACCC GGCCAACGCC
CAACTGCGCG CCGATGCTCG CGCACAGGCG CTGGCCTATT TCACTGCTCA GTGCGGCGGC
AACGTCAACA ATTGCATGAC GGCCATCGAC CCGGCCACTG ACCGCACTTC CCAACACGCA
CAGGACAAGG CGCTGTACAC CGCGCGCATG ACCTACGGCT TCGACCCGGT CGGCCCGACC
AACCTCGCCC CGGTCGTGCC AACCAACGCT GAAGTGCTGC TGGAAACACG CTTCCCGTAC
CTGGACGCCA GCCAGCGCCG CGAGATTCTG GCGACCACTG AACTGTCGTC GGGCTACGCA
GTGATCGATC AGTCAGGTGG CTACGGTCGC TTGAACCTGT ATGCCGCAGG CGATGGCTAC
GGCGCGTTCA ATTCCAACGT CACCGTCAAC ATGAACGCCA GCCTGGGCGG CTACAACGCC
ATCGACGCCT GGCGCAACGA CATCAGCGGC AGCGGAGCGC TGATCAAGAA CGGTACGGGC
AACCTGATCC TGACCGGCAA CAACACCTAC TCGGGCGGCA CGCTGATCAA AGGCGGCACC
CTGACCGGTC ATGCCCAGGC CTTTGGCAGC GGCACGATCA CCGACAACGC AACGCTGGTA
GTCGATCAGT CCACCAACGA CACCCTCGCC AACACCCTGA CCGGCAACGG TGCGCTGATC
AAACGCGGTG TCGGCTCACT GAACCTGACC GGCAACAGCA GCCTGTCCGG CGCGACGACC
GTGCAGGCCG GTCGCCTGGC AGTGAATGGT AGCCTCGGCA ACTCCATCGT CAGCGTGCAG
CAAGGCGCAA CGCTGGGTGG CAACGGCACC GTCGGCGGCA TCAACGTCGC TCAGGGCGGC
GTGGTCGCGC CGGGTAATTC GGTCGGGCAA CTGAACGTCA ACGGTGACGT CAACCTGGCT
CAGGGTTCGG TCTATCAGGT CGAGTCGGAC GCCAGTGGCA AAGCCGACCG CATCGTCGCC
AGCGGTCGCG CGACGATCAA TAACAGCACG CTGTCGCTGG TCGAAGGCGG TAACTGGCTG
GCCGCGAGCC GTTATTCGAT CCTCTCCGCA GCCGGTGGCG TGAGCGGTGC ATTTGCCGCC
GTGCAAACCA ACTTCGCGTT CCTTACTCCG ACGTTGAACT ACACCGCGAC CGATGTCGGC
CTGACACTGG ATCGCAACGC ACAAACCTTC GCCAGCCTGG CGCCCACGCG CAATGCCAAG
GCGGTCGCAC AGGGTCTGGA CAGCGCGGGG GCAGGCAATG CGCTGTGGCG TCAGGTGGTG
CAGGACGACG CCTCGACGGC GCAGGCCACG TTCAGCGCGC TGTCCAACGA GCTGCATGCA
TCGACCCAAT CTGCATTGAT CGAAGACAGC CGACTCGTGC GCAATGCCAT GAATGCTCGC
ATGCAACAAG CGCAATCCGC ACAGGCATTC GGCAGCACCA CGCAAACCCT CGCCGGTGAC
GCCTCGCGCG GTGTGGTGTG GACCCAGGCC ATCGGCGCGA CCGGCCAGAC CGACAGCAGC
CGCGACGCCT CGGGCCTCGA AACCCGCACC AGCGGCCTGC TGTTCGGCGC CGACGTACCG
CTCGACGACA CCTGGCGTGT GGGTGCATTG GCCGGCTTCA GCAACAGCAG CTTCGACCTG
CGCCACGCGT CCGGCTCGAC CGACAGCGAC AACTACCACC TGGGTGTCTA CGGCGGCGCG
AAATGGGGCC AACTGGGCCT GCGCCTCGGC GCGGTACGCA CCTGGCATGA GCTGACCGCC
AAGCGCACGC TGGACCTGCC GGGCTCGTCC GAGCACTTCA AGGAAGACTA CAAGGCAGCG
ACCAATCAGG TCTTCGGCGA ACTGGGCTAC ACCCTGGAAA TGGGCAACGC ACAGCTTGAA
CCCTTCGCCA ACCTGGCACA CGTACGCCTG GACACCGACG CCTTCGACGA GAACAGCAAC
GCCATCAGCC TGCAGAACAA GTCCCAGGAC AACCACATCA CCTTCAGCAC CCTGGGCCTG
CGTGCAGCGA CTCACTTGAG CGCTGGCAAC GTCGTGATCA AACCCAACGC CACACTGGGC
TGGCGTCGCA CCTACGGCGA CGTCACCCCG GAAAGCCGCT CGGCCTTCAG CGGCGGCAGC
ACCTTCGAAC TCTCCGGCGC CCCCATCGCC CGCAGCGCAG CCGTGCTCGG CGCAGGTGTC
GACCTGGGGT TGAGCGATAC CTTGAGCGTA GGCCTGAGCT ACGACGGACA GGTGAGCAAC
GACGCATCGG ACCAGTCGCT GAATGCTCGG GTGACATTGG CGTTTTAA
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| Protein sequence | MDLLSGFNTL WTTGATWDTG TPTALGQSLL RRNLQIVVDR ANSRTLAQET AAYFDDRRDQ
SYSAISGLGS LSDAYKAGAG AFTTITQFDD SNKTVRYDDK GNGAGSSSSA LGKVVDLVGA
VRNDASTTPA KSHYLYPRPW RQSLDGQSLA FVVAPSLRPA ESTTPASDSG FPSGHTNAAY
LSAYALAYAI PERFSELMLR ASEIGDNRIE AGMHSPFDVM GGRITATYFA IDNLSNPANA
QLRADARAQA LAYFTAQCGG NVNNCMTAID PATDRTSQHA QDKALYTARM TYGFDPVGPT
NLAPVVPTNA EVLLETRFPY LDASQRREIL ATTELSSGYA VIDQSGGYGR LNLYAAGDGY
GAFNSNVTVN MNASLGGYNA IDAWRNDISG SGALIKNGTG NLILTGNNTY SGGTLIKGGT
LTGHAQAFGS GTITDNATLV VDQSTNDTLA NTLTGNGALI KRGVGSLNLT GNSSLSGATT
VQAGRLAVNG SLGNSIVSVQ QGATLGGNGT VGGINVAQGG VVAPGNSVGQ LNVNGDVNLA
QGSVYQVESD ASGKADRIVA SGRATINNST LSLVEGGNWL AASRYSILSA AGGVSGAFAA
VQTNFAFLTP TLNYTATDVG LTLDRNAQTF ASLAPTRNAK AVAQGLDSAG AGNALWRQVV
QDDASTAQAT FSALSNELHA STQSALIEDS RLVRNAMNAR MQQAQSAQAF GSTTQTLAGD
ASRGVVWTQA IGATGQTDSS RDASGLETRT SGLLFGADVP LDDTWRVGAL AGFSNSSFDL
RHASGSTDSD NYHLGVYGGA KWGQLGLRLG AVRTWHELTA KRTLDLPGSS EHFKEDYKAA
TNQVFGELGY TLEMGNAQLE PFANLAHVRL DTDAFDENSN AISLQNKSQD NHITFSTLGL
RAATHLSAGN VVIKPNATLG WRRTYGDVTP ESRSAFSGGS TFELSGAPIA RSAAVLGAGV
DLGLSDTLSV GLSYDGQVSN DASDQSLNAR VTLAF
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