Gene Psyr_0304 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0304 
Symbol 
ID3365780 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp324350 
End bp325018 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content64% 
IMG OID637650647 
ProductChaC-like protein 
Protein accessionYP_233415 
Protein GI66043574 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3703] Uncharacterized protein involved in cation transport 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.758482 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGAATC CAATCAACGA GTTGGCCGCT GCAGTGCACG ACGGTCTTGG CCTGACGTAT 
CCGCCCGTTA TCGATATGGG CCCACAGCTC ACCCGCGAGC AACTGCTCGC ATCCATGAAC
GCCACCATGC GTCGTCACAA GGGCGGCCCG GTCTGGCTGT TCGCCTATGG TTCACTGATC
TGGCGTCCCG AGTGCACCGC CGTGGAGAGC CAGCGCGCCC GAGTGCACGG TTATCACCGC
GGACTTTACC TCTGGTCGCA CGAACACCGT GGCACGCCGG AAGTGCCGGG GCTGGTATTC
GGTCTGGACC GTGGCGGTTC ATGCACCGGC TTCGCGTATC GTCTGCCGGA TGAATGCCTG
GAAAAATCAC TGCTGGCCTT GTGGGAGCGC GAGATGCCGT ACCCCTCGTA TCGCCCGCAC
TGGCTCAATT GCCGCCTTGA AGATGGCCGG AAGGTACAGG CCCTGGGCTT TGTGCTGGAG
CGGCATTTGC CCAGCTACGC AGGCAACCTG CCGGACAGCG TGCTGAGCCA GGTGCTCGCC
AGCGCCAGAG GGCGCTATGG AACCACCCGC GAGTACGTCG AGCAGACCGC CAAGGCCCTG
CGTAGCCACG CCATGCCAGA CCTGAATCTG GAGGCGCGGC TCAAGCGCTG CAAGTCAGAG
ACTGCCTGA
 
Protein sequence
MENPINELAA AVHDGLGLTY PPVIDMGPQL TREQLLASMN ATMRRHKGGP VWLFAYGSLI 
WRPECTAVES QRARVHGYHR GLYLWSHEHR GTPEVPGLVF GLDRGGSCTG FAYRLPDECL
EKSLLALWER EMPYPSYRPH WLNCRLEDGR KVQALGFVLE RHLPSYAGNL PDSVLSQVLA
SARGRYGTTR EYVEQTAKAL RSHAMPDLNL EARLKRCKSE TA