Gene Psyr_0299 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0299 
Symbol 
ID3365775 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp318912 
End bp319616 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content63% 
IMG OID637650642 
Producttranscriptional regulator GntR 
Protein accessionYP_233410 
Protein GI66043569 
COG category[K] Transcription 
COG ID[COG2186] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCACA CTTCACTCGC AGTACCCGAA TCAGCCCTCC GGGCCATTCG CAAATTGATC 
GCCGAGCAAG GGTACAAGCC CGGCGAAAGC CTGCCGTCGC AACGCGATCT GGCGGTATTG
CTGGGGGTCA GTCGTGCGTC CTTGCGTGAA GCCTTGTCGT CGCTCAGCGC ACTCGGAGTG
GTCAGTGTCC AGCCCGGCAA AGGCGTCTTC GTGCAGTCGA TTTCTGAACC AGAACAGCGC
ACGGGTGGTT TTTCCTGGCC TTATGAAGCT CAGGTTTCCC CGGCCGACAC TTTTCAGTTG
CGCTACGCAC TGGAAGGTTT CGCTGCAGGC ATGGCCGCCG TGACCCTGAC CGCCGACGAG
CGCGATGTAC TGGAGGACAA CGTCGAAGCC ATGCGCCTGG AATTGCGGGC CGGTGACTTC
GAGGCTGCGG CGCGGCTGGA CTTCGAGTTT CATCGGCACA TTCTGGTCGC CAGCGGCAAT
CAGGCGATGC TCGGGATCGT GACTGCCGGG GCCGACATCT TCCTGGAAAG CCAGAAGATG
CCGTTCATCC GGGCGGCCAG GGTCATGGAG ACCTGGCAGG AGCACCGCAA GATCCTTCGC
GCGCTGGCCC GACATGCGTC AGGGCCTGCG CAAAAGGCCA TGCAGGACCA TATTCGTGGC
GCGGCACTGC GCACCGGCAT CGTCTTCGTT TCGCCCGCGA ACTGA
 
Protein sequence
MPHTSLAVPE SALRAIRKLI AEQGYKPGES LPSQRDLAVL LGVSRASLRE ALSSLSALGV 
VSVQPGKGVF VQSISEPEQR TGGFSWPYEA QVSPADTFQL RYALEGFAAG MAAVTLTADE
RDVLEDNVEA MRLELRAGDF EAAARLDFEF HRHILVASGN QAMLGIVTAG ADIFLESQKM
PFIRAARVME TWQEHRKILR ALARHASGPA QKAMQDHIRG AALRTGIVFV SPAN