Gene Psyr_0289 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0289 
Symbol 
ID3365765 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp307483 
End bp308541 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content61% 
IMG OID637650632 
Productradical SAM family protein 
Protein accessionYP_233400 
Protein GI66043559 
COG category[L] Replication, recombination and repair 
COG ID[COG1533] DNA repair photolyase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCAGCC CCTATCCGGT TCGTGGCCGA GGTACTGCCA GCAATCCGCA TAACCGCTTC 
GCACCCAGTC AGTCGGTGGC CGAAGATGAT GGCTGGTATC AGGAAGTGCC GCTTACGCAA
GGCACCCAGG TCACCAGCGA AACAGCCAAA AGCATCATTA CCCGCAACAG CTCGCCGGAT
ATCCCCTTTG ACAGGTCGAT CAACCCTTAC CGGGGCTGCG AGCACGGCTG CATCTATTGT
TTCGCCAGAC CCAGCCACGC CTACTGGGAC ATGTCGCCCG GCCTGGACTT CGAGACCAGG
CTGATCGCAA AGACCAACGC GGCGGCGCTG CTCGAGCAGC AGCTGTCCAA GCCCGGCTAC
CGCTGCGCGC CCATTACCCT CGGGGCCAAC ACCGACCCCT ACCAGCCGAT CGAACGTGAG
TACCGCATCA CCCGGGCGAC GCTTGAGGTG TTACTGCGCT ATCGGCATCC GGTCAGCATC
ATTACCAAAG GCTCGCTGAT CCTGCGCGAT CTGGATCTGC TGGCAGAGAT GGCCAGGCTA
CGGCTGGTGT CGGTGTTCGT CAGCCTGACC ACACTGGATG ACGAACTCAA ATGTATCCTC
GAGCCCAGAG CTGCGGCGCC CAAGGCTCGC CTGCGGGCCA TTCGGGTATT GCGCCAGGCG
GGTGTCCCGG TCGGTGTGCT GTGTGCGCCG ATGATCCCGA TGATCAATGA CAGCGAGCTG
GAGGCACTGC TGAGCGAAGC GAAGGCTGCA GGCGCCCTGA GCGCCAGCTA CGTGATGTTG
CGCCTGCCGC TGGAAGTCGC GCCGCTGTTC GACGAGTGGC TGAAGACACA TTACCCGCAA
CGCGCCGAGC ATGTCATGAG TCTGATTCGT CAAAGTCGCG GCGGAGCCGT GTACGACAGC
ACGTTTGGTT CTCGAATGCG TGGCGAAGGA CCGTTTGCCG ACCTGCTGGC TCAACGCTAT
GCCTTGGCAA TCAAACGACT CGGATTGAAC AAACGGGGTG GATTTGCACT CGATTGCGAT
GCGTTTTGTC CGCCGGGAGG GCAAATGTCG CTGCTGTGA
 
Protein sequence
MSSPYPVRGR GTASNPHNRF APSQSVAEDD GWYQEVPLTQ GTQVTSETAK SIITRNSSPD 
IPFDRSINPY RGCEHGCIYC FARPSHAYWD MSPGLDFETR LIAKTNAAAL LEQQLSKPGY
RCAPITLGAN TDPYQPIERE YRITRATLEV LLRYRHPVSI ITKGSLILRD LDLLAEMARL
RLVSVFVSLT TLDDELKCIL EPRAAAPKAR LRAIRVLRQA GVPVGVLCAP MIPMINDSEL
EALLSEAKAA GALSASYVML RLPLEVAPLF DEWLKTHYPQ RAEHVMSLIR QSRGGAVYDS
TFGSRMRGEG PFADLLAQRY ALAIKRLGLN KRGGFALDCD AFCPPGGQMS LL